RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 GMEB2Q9UKD1 530 aa10.65□□□□□ -0.7
XRCC3-208ENST00000554811 ZNF432O94892 652 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 IL33O95760 270 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 F12P00748 615 aaPredicted RBP10.64□□□□□ -0.71
XRCC3-208ENST00000554811 SNU13P55769 128 aaKnown RBP10.64□□□□□ -0.71
XRCC3-208ENST00000554811 ALKBH2Q6NS38 261 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 UNQ9370/PRO34162Q6UXP9 181 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 MRPL38Q96DV4 380 aaKnown RBP10.64□□□□□ -0.71
XRCC3-208ENST00000554811 KLHL13Q9P2N7 655 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 MBD2Q9UBB5 411 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 C2CD4DB7Z1M9 353 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 STK17BO94768 372 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 HEXBP07686 556 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 ASAH2BP0C7U1 165 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 MRPS21P82921 87 aaKnown RBP10.64□□□□□ -0.71
XRCC3-208ENST00000554811 FUT7Q11130 342 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 PPP1R1AQ13522 171 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 GGTLC2Q14390 218 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 MANEAQ5SRI9 462 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 C9orf40Q8IXQ3 194 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 CMIPQ8IY22 773 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 ROBO4Q8WZ75 1007 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 LRRC46Q96FV0 321 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 ZNF578Q96N58 590 aaPredicted RBP10.64□□□□□ -0.71
XRCC3-208ENST00000554811 NMNAT2Q9BZQ4 307 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 MRPL22Q9NWU5 206 aaKnown RBP10.64□□□□□ -0.71
XRCC3-208ENST00000554811 CLEC1BQ9P126 229 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 TICRRQ7Z2Z1 1910 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 PRR19A6NJB7 356 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 ERCC1P07992 297 aaPredicted RBP10.64□□□□□ -0.71
XRCC3-208ENST00000554811 GABRA1P14867 456 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 CEBPGP53567 150 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 ADGRE4PQ86SQ3 457 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 PXT1Q8NFP0 134 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 OR1L3Q8NH93 324 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 TMED6Q8WW62 240 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 ASB5Q8WWX0 329 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 PHYHIPQ92561 330 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 SEH1LQ96EE3 360 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 SOX7Q9BT81 388 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 HRH4Q9H3N8 390 aa10.64□□□□□ -0.71
XRCC3-208ENST00000554811 NPDC1Q9NQX5 325 aaPredicted RBP10.64□□□□□ -0.71
XRCC3-208ENST00000554811 TEX51A0A1B0GUA7 166 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 G3V3Q6 166 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 CTDSPLO15194 276 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 ZNHIT1O43257 154 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 FBXO24O75426 580 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 CCINQ13939 588 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 FAM57BQ71RH2 274 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 SLC26A10Q8NG04 563 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 OR10R2Q8NGX6 335 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 OR52N5Q8NH56 324 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 SLC25A28Q96A46 364 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 CST11Q9H112 138 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 PPP4R1LQ9P1A2 415 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 ASH2LQ9UBL3 628 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 RHBDD3Q9Y3P4 386 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 TRBV11-1A0A0K0K1C0 115 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 A0A1W2PPC4 97 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 SLC22A23A1A5C7 686 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 NPIPB9F8W1W9 429 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 CDK2AP1O14519 115 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 SPINK2P20155 84 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 POLR2HP52434 150 aaKnown RBP10.63□□□□□ -0.71
XRCC3-208ENST00000554811 RAG2P55895 527 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 MFSD13AQ14CX5 517 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 NR0B2Q15466 257 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 BIVMQ86UB2 503 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 OR6N1Q8NGY5 312 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 NICN1Q9BSH3 213 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.63□□□□□ -0.71
XRCC3-208ENST00000554811 CNTD2Q9H8S5 307 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 FSCN3Q9NQT6 498 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 MLXQ9UH92 298 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 HS3ST3A1Q9Y663 406 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 NBASA2RRP1 2371 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 IGHV3-15A0A0B4J1V0 119 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 IGKV1D-43A0A0B4J1Z2 117 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 TLCD2A6NGC4 264 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 A8MVM7 634 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 F10P00742 488 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 SERPINA2P20848 420 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 SLC25A1P53007 311 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 TAGLNQ01995 201 aaKnown RBP10.63□□□□□ -0.71
XRCC3-208ENST00000554811 AIMP2Q13155 320 aaKnown RBP10.63□□□□□ -0.71
XRCC3-208ENST00000554811 EBPQ15125 230 aaKnown RBP10.63□□□□□ -0.71
XRCC3-208ENST00000554811 ELFN2Q5R3F8 820 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 EXOSC6Q5RKV6 272 aaKnown RBP10.63□□□□□ -0.71
XRCC3-208ENST00000554811 ATPAF1Q5TC12 328 aaPredicted RBP10.63□□□□□ -0.71
XRCC3-208ENST00000554811 VN1R1Q9GZP7 353 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 WWTR1Q9GZV5 400 aa10.63□□□□□ -0.71
XRCC3-208ENST00000554811 VSTM2BA6NLU5 285 aa10.62□□□□□ -0.71
XRCC3-208ENST00000554811 SNRPGP15A8MWD9 76 aa10.62□□□□□ -0.71
XRCC3-208ENST00000554811 STMND1H3BQB6 276 aa10.62□□□□□ -0.71
XRCC3-208ENST00000554811 SHOXO15266 292 aa10.62□□□□□ -0.71
XRCC3-208ENST00000554811 AMY2BP19961 511 aa10.62□□□□□ -0.71
XRCC3-208ENST00000554811 CD96P40200 585 aa10.62□□□□□ -0.71
XRCC3-208ENST00000554811 SLC6A8P48029 635 aa10.62□□□□□ -0.71
XRCC3-208ENST00000554811 ZNF41P51814 821 aaPredicted RBP10.62□□□□□ -0.71
XRCC3-208ENST00000554811 RPS4XP62701 263 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms