RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 ABCG2Q9UNQ0 655 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 HS3ST2Q9Y278 367 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 MRPS33Q9Y291 106 aaKnown RBP1.08□□□□□ -2.24
PRPF39-208ENST00000554785 MEMO1Q9Y316 297 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 PLLPQ9Y342 182 aa1.08□□□□□ -2.24
PRPF39-208ENST00000554785 IGHV7-81A0A0B4J1V7 117 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 A0A1B0GWB2 263 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 TUBAL3A6NHL2 446 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 OR2AG2A6NM03 316 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 A8MU10 97 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 KLLNB2CW77 178 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 C10orf142B7Z368 130 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 C21orf140B9A014 251 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 EEF1E1-BLOC1S5C9J1V9 151 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 C9J4A7 227 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 E7ESA3 106 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 KRTAP4-16G5E9R7 235 aaPredicted RBP1.07□□□□□ -2.24
PRPF39-208ENST00000554785 GOLGA8SH3BPF8 625 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 H3BQV1 296 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 KIF2AO00139 706 aaPredicted RBP1.07□□□□□ -2.24
PRPF39-208ENST00000554785 BTN3A3O00478 584 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 HDAC3O15379 428 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 MAGEB3O15480 346 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 RS1O15537 224 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 ZW10O43264 779 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 EEF1E1O43324 174 aaKnown RBP1.07□□□□□ -2.24
PRPF39-208ENST00000554785 HCRTR1O43613 425 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 GMFGO60234 142 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 HCN1O60741 890 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 PFKFB2O60825 505 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 GNA14O95837 355 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 CD160O95971 181 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 LALBAP00709 142 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 STATHP02808 62 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 PRB2P02812 416 aaPredicted RBP1.07□□□□□ -2.24
PRPF39-208ENST00000554785 ALOX5P09917 674 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 PIRTP0C851 137 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 RNH1P13489 461 aaKnown RBP1.07□□□□□ -2.24
PRPF39-208ENST00000554785 HNF1AP20823 631 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 PTNP21246 168 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 CCR1P32246 355 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 NUDT1P36639 197 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 CAPZBP47756 277 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 P2RY1P47900 373 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 STX17P56962 302 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 LYZP61626 148 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 GNA12Q03113 381 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 CHRNB3Q05901 458 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 INCA1Q0VD86 236 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF235Q14590 738 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 CHRFAM7AQ494W8 412 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 ANKDD1AQ495B1 522 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 CFAP157Q5JU67 520 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 ATAD3BQ5T9A4 648 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 TTC23Q5W5X9 447 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 TMEM225Q6GV28 225 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 CCDC137Q6PK04 289 aaKnown RBP1.07□□□□□ -2.24
PRPF39-208ENST00000554785 WDR74Q6RFH5 385 aaPredicted RBP1.07□□□□□ -2.24
PRPF39-208ENST00000554785 HSD17B13Q7Z5P4 300 aaPredicted RBP1.07□□□□□ -2.24
PRPF39-208ENST00000554785 TMEM179BQ7Z7N9 219 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 MOB3BQ86TA1 216 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 LCA5Q86VQ0 697 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 RAB43Q86YS6 212 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 TRAPPC5Q8IUR0 188 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 NRMQ8IXM6 262 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 ANKFN1Q8N957 763 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 IPMKQ8NFU5 416 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 OR4D5Q8NGN0 318 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 LINC01560Q8TB33 94 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 PAQR8Q8TEZ7 354 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 TCTEX1D2Q8WW35 142 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 SHC3Q92529 594 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 DNAJC19Q96DA6 116 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 TRIM44Q96DX7 344 aaPredicted RBP1.07□□□□□ -2.24
PRPF39-208ENST00000554785 PELI1Q96FA3 418 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 PHYHIPLQ96FC7 376 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 NICN1Q9BSH3 213 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 TUBGCP2Q9BSJ2 902 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 RNF126Q9BV68 326 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 TIPINQ9BVW5 301 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 SPATA16Q9BXB7 569 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 SRXN1Q9BYN0 137 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 RHBGQ9H310 441 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 SLC17A5Q9NRA2 495 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 SIGLEC8Q9NYZ4 499 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 IL17CQ9P0M4 197 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 C6orf203Q9P0P8 240 aaPredicted RBP1.07□□□□□ -2.24
PRPF39-208ENST00000554785 CTSFQ9UBX1 484 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 WARS2Q9UGM6 360 aaKnown RBP1.07□□□□□ -2.24
PRPF39-208ENST00000554785 TBK1Q9UHD2 729 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 DCDC2Q9UHG0 476 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 LCMT1Q9UIC8 334 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 STOML2Q9UJZ1 356 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 HPCAL4Q9UM19 191 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 OR51B4Q9Y5P0 310 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 WIF1Q9Y5W5 379 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 YLPM1P49750 1951 aaKnown RBP1.07□□□□□ -2.24
PRPF39-208ENST00000554785 COL7A1Q02388 2944 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 PCLOQ9Y6V0 5065 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 IGHV1OR15-1A0A075B7D0 117 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms