RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 TIMM23BQ5SRD1 257 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 FDX2Q6P4F2 183 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 STAC2Q6ZMT1 411 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 LIX1LQ8IVB5 337 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 OR10S1Q8NGN2 331 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 OR1F12Q8NHA8 337 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 CCDC120Q96HB5 630 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 OPALINQ96PE5 141 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 KCNJ15Q99712 375 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 WNT5BQ9H1J7 359 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 SP140LQ9H930 580 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 ZNF224Q9NZL3 707 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 R4GMQ9 66 aa12.55□□□□□ -0.4
SHOX2-206ENST00000554685 ACOD1A6NK06 481 aa12.54□□□□□ -0.4
SHOX2-206ENST00000554685 LOC110117498-PIK3R3F6TDL0 507 aa12.54□□□□□ -0.4
SHOX2-206ENST00000554685 C16orf97H3BN30 126 aa12.54□□□□□ -0.4
SHOX2-206ENST00000554685 OGG1O15527 345 aa12.54□□□□□ -0.4
SHOX2-206ENST00000554685 SYNGR3O43761 229 aa12.54□□□□□ -0.4
SHOX2-206ENST00000554685 RPP14O95059 124 aaKnown RBP12.54□□□□□ -0.4
SHOX2-206ENST00000554685 CD1AP06126 327 aa12.54□□□□□ -0.4
SHOX2-206ENST00000554685 PSMA1P25786 263 aaKnown RBP12.54□□□□□ -0.4
SHOX2-206ENST00000554685 RGS6P49758 472 aa12.54□□□□□ -0.4
SHOX2-206ENST00000554685 MMP16P51512 607 aa12.54□□□□□ -0.4
SHOX2-206ENST00000554685 CCR9P51686 369 aa12.54□□□□□ -0.4
SHOX2-206ENST00000554685 TPTEP56180 551 aa12.54□□□□□ -0.4
SHOX2-206ENST00000554685 PSMA6P60900 246 aaKnown RBP12.54□□□□□ -0.4
SHOX2-206ENST00000554685 ALKBH1Q13686 389 aaKnown RBP12.54□□□□□ -0.4
SHOX2-206ENST00000554685 CDK5R1Q15078 307 aa12.54□□□□□ -0.4
SHOX2-206ENST00000554685 TRAM1Q15629 374 aa12.54□□□□□ -0.4
SHOX2-206ENST00000554685 IGFBP7Q16270 282 aa12.54□□□□□ -0.4
SHOX2-206ENST00000554685 TSTQ16762 297 aaKnown RBP12.54□□□□□ -0.4
SHOX2-206ENST00000554685 TIMM50Q3ZCQ8 353 aa12.54□□□□□ -0.4
SHOX2-206ENST00000554685 FBXL19-AS1Q494R0 122 aa12.54□□□□□ -0.4
SHOX2-206ENST00000554685 ZNF774Q6NX45 483 aa12.54□□□□□ -0.4
SHOX2-206ENST00000554685 ZNF283Q8N7M2 679 aa12.54□□□□□ -0.4
SHOX2-206ENST00000554685 LILRB4Q8NHJ6 448 aa12.54□□□□□ -0.4
SHOX2-206ENST00000554685 AKR7LQ8NHP1 331 aa12.54□□□□□ -0.4
SHOX2-206ENST00000554685 MUCL1Q96DR8 90 aa12.54□□□□□ -0.4
SHOX2-206ENST00000554685 DCLRE1CQ96SD1 692 aaKnown RBP12.54□□□□□ -0.4
SHOX2-206ENST00000554685 B3GNT2Q9NY97 397 aa12.54□□□□□ -0.4
SHOX2-206ENST00000554685 TRBV2A0A0J9YWF9 115 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 SMIM31A0A1B0GVY4 71 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 TMEM269A0A1B0GVZ9 245 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 MAGEB4O15481 346 aaPredicted RBP12.53□□□□□ -0.4
SHOX2-206ENST00000554685 PLPP2O43688 288 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 GPRIN2O60269 458 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 NOL3O60936 208 aaKnown RBP12.53□□□□□ -0.4
SHOX2-206ENST00000554685 PATE4P0C8F1 98 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 CBR1P16152 277 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 PPP3CBP16298 524 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 CELP19835 753 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 AGAP20933 346 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 APLNRP35414 380 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 CX3CR1P49238 355 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 ADORA2A-AS1P86434 159 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 SOWAHCQ53LP3 525 aaPredicted RBP12.53□□□□□ -0.4
SHOX2-206ENST00000554685 LIPKQ5VXJ0 399 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 DMKNQ6E0U4 476 aaPredicted RBP12.53□□□□□ -0.4
SHOX2-206ENST00000554685 DRAM2Q6UX65 266 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 SATL1Q86VE3 508 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 PHC2Q8IXK0 858 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 FAM169BQ8N8A8 192 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 OR1J2Q8NGS2 313 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 FGFBP3Q8TAT2 258 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 CA5BP1Q8WTZ4 195 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 SMIM19Q96E16 107 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 COMMD4Q9H0A8 199 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 NDUFB11Q9NX14 153 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 ST6GALNAC2Q9UJ37 374 aa12.53□□□□□ -0.4
SHOX2-206ENST00000554685 COL6A6A6NMZ7 2263 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 TMEM212A6NML5 194 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 E9PI62 339 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 M0R135 149 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 LALBAP00709 142 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 PRB1P04280 392 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 SERPINA5P05154 406 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 CD36P16671 472 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 CRYGSP22914 178 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 OTX1P32242 354 aaPredicted RBP12.52□□□□□ -0.41
SHOX2-206ENST00000554685 LIPAP38571 399 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 PSMB10P40306 273 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 UQCRFS1P47985 274 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 GDI2P50395 445 aaKnown RBP12.52□□□□□ -0.41
SHOX2-206ENST00000554685 PRKXP51817 358 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 GALK2Q01415 458 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 TSC22D1Q15714 1073 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 C3orf36Q3SXR2 165 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 BCL2L15Q5TBC7 163 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 XKRXQ6PP77 449 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 ARL9Q6T311 187 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 ZNF704Q6ZNC4 412 aaPredicted RBP12.52□□□□□ -0.41
SHOX2-206ENST00000554685 MDP1Q86V88 176 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 MS4A15Q8N5U1 240 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 WDR31Q8NA23 367 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 OR2G2Q8NGZ5 317 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 RPS4Y2Q8TD47 263 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 HSD17B8Q92506 261 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 THRSPQ92748 146 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 TMIGD2Q96BF3 282 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 YIPF6Q96EC8 236 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms