RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 MMP15P51511 669 aa12.71□□□□□ -0.38
VTI1B-204ENST00000554659 RPL18Q07020 188 aaKnown RBP12.71□□□□□ -0.38
VTI1B-204ENST00000554659 EXT1Q16394 746 aa12.71□□□□□ -0.38
VTI1B-204ENST00000554659 MUCL1Q96DR8 90 aa12.71□□□□□ -0.38
VTI1B-204ENST00000554659 FAM122AQ96E09 287 aa12.71□□□□□ -0.38
VTI1B-204ENST00000554659 MYEOVQ96EZ4 313 aa12.71□□□□□ -0.38
VTI1B-204ENST00000554659 RYDENQ9NUL5 291 aaKnown RBP12.71□□□□□ -0.38
VTI1B-204ENST00000554659 HSD17B6O14756 317 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 EFSO43281 561 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 OR4E1P0C645 316 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 HOXC8P31273 242 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 SELENBP1Q13228 472 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 PRTGQ2VWP7 1150 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 PRSS36Q5K4E3 855 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 OR51E1Q8TCB6 317 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 APH1BQ8WW43 257 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 ZNF230Q9UIE0 474 aaPredicted RBP12.7□□□□□ -0.38
VTI1B-204ENST00000554659 FLVCR2Q9UPI3 526 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 PRELID3BQ9Y3B1 194 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 ZNF816-ZNF321PA0A0X1KG74 233 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 CXorf51AA0A1B0GTR3 108 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 CBY3A6NI87 242 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 SPNP16150 400 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 MGMTP16455 207 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 KIR2DL3P43628 341 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 PLXDC2Q6UX71 529 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 Q6ZNB5 142 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 CA13Q8N1Q1 262 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 ZNF321PQ8N8H1 164 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 NEURL2Q9BR09 285 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 GINS3Q9BRX5 216 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 S1PR5Q9H228 398 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 AKR7A2O43488 359 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 TGM1P22735 817 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 RBP2P50120 134 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 HAGHQ16775 308 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 PLAC9Q5JTB6 97 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 ZBTB44Q8NCP5 570 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 ASB16Q96NS5 453 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 JAM3Q9BX67 310 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 ISG20L2Q9H9L3 353 aaKnown RBP12.7□□□□□ -0.38
VTI1B-204ENST00000554659 CALHM2Q9HA72 323 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 MTCH1Q9NZJ7 389 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 PRRC2BQ5JSZ5 2229 aaKnown RBP12.7□□□□□ -0.38
VTI1B-204ENST00000554659 ZNF732B4DXR9 585 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 DCTN6O00399 190 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 METTL15P1P0C7V9 234 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 EPXP11678 715 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 GPR85P60893 370 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 RUNX2Q13950 521 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 GNPNAT1Q96EK6 184 aaPredicted RBP12.7□□□□□ -0.38
VTI1B-204ENST00000554659 PBX4Q9BYU1 374 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 SSUH2Q9Y2M2 353 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 THEM4Q5T1C6 240 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 RNF165Q6ZSG1 346 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 FAM185AQ8N0U4 392 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 SLC38A9Q8NBW4 561 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 R4GMQ9 66 aa12.7□□□□□ -0.38
VTI1B-204ENST00000554659 G3V3Y1 287 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 OR8U8P0C7N1 319 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 CD27P26842 260 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 VAMP3Q15836 100 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 LPAL2Q16609 132 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 TFAP2EQ6VUC0 442 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 SSX7Q7RTT5 188 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 TMEM123Q8N131 208 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 SLC35G3Q8N808 338 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 NECAP1Q8NC96 275 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 EMG1Q92979 244 aaKnown RBP12.69□□□□□ -0.38
VTI1B-204ENST00000554659 ZNF2Q9BSG1 426 aaPredicted RBP12.69□□□□□ -0.38
VTI1B-204ENST00000554659 AUNIPQ9H7T9 357 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 AK3Q9UIJ7 227 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 KCND3Q9UK17 655 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 SLC31A2O15432 143 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 YKT6O15498 198 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 PEX11BO96011 259 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 CD3DP04234 171 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 GLI4P10075 376 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 MFSD4AQ8N468 514 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 OR51H1Q8NH63 302 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 CMTM3Q96MX0 182 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 PTDSS2Q9BVG9 487 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 A0A0B4J203 849 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 PRSS37A4D1T9 235 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 ABOP16442 354 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 SLC17A1Q14916 467 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 FXNQ16595 210 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 SPNS2Q8IVW8 549 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 BPIFCQ8NFQ6 507 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 SPNS1Q9H2V7 528 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 PLEKHA2Q9HB19 425 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 PRRT4C9JH25 899 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 MLF1P58340 268 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 FAAP20Q6NZ36 180 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 OR10J5Q8NHC4 309 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 ST8SIA1Q92185 356 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 C12orf57Q99622 126 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 DOK1Q99704 481 aa12.69□□□□□ -0.38
VTI1B-204ENST00000554659 FAM103A1Q9BTL3 118 aaKnown RBP12.69□□□□□ -0.38
VTI1B-204ENST00000554659 J3QR89 54 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms