RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 PCYOX1LQ8NBM8 494 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 MAPK1IP1LQ8NDC0 245 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 NUP37Q8NFH4 326 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 OR2T12Q8NG77 320 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 OR52N4Q8NGI2 321 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 PFN4Q8NHR9 129 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 FGFBP3Q8TAT2 258 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 TMEM255BQ8WV15 326 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 RASSF5Q8WWW0 418 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 LIPHQ8WWY8 451 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 PROX1Q92786 737 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 MPP4Q96JB8 637 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 LYZL4Q96KX0 146 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 LRR1Q96L50 414 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 PRRC1Q96M27 445 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 ZNF75AQ96N20 296 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 SEPHS2Q99611 448 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 SH3GL1Q99961 368 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 ECSITQ9BQ95 431 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 REG4Q9BYZ8 158 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 SLC19A3Q9BZV2 496 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 POLR2J2Q9GZM3 115 aaKnown RBP3.57□□□□□ -1.84
VTI1B-203ENST00000554636 RBM38Q9H0Z9 239 aaKnown RBP3.57□□□□□ -1.84
VTI1B-203ENST00000554636 POLR2J3Q9H1A7 115 aaKnown RBP3.57□□□□□ -1.84
VTI1B-203ENST00000554636 MYLK2Q9H1R3 596 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 ZNF442Q9H7R0 627 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 CRLF2Q9HC73 371 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 MEPEQ9NQ76 525 aaPredicted RBP3.57□□□□□ -1.84
VTI1B-203ENST00000554636 MAN2C1Q9NTJ4 1040 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 C20orf141Q9NUB4 165 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 FAIMQ9NVQ4 179 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 GID8Q9NWU2 228 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 B3GNT2Q9NY97 397 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 TAS2R5Q9NYW4 299 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 ZNF224Q9NZL3 707 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 ZNF229Q9UJW7 825 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 POU2F3Q9UKI9 436 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 BAG5Q9UL15 447 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 SLC7A7Q9UM01 511 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 A4GNTQ9UNA3 340 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 MOKQ9UQ07 419 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 LRP12Q9Y561 859 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 NIPBLQ6KC79 2804 aaeCLIP3.57□□□□□ -1.84
VTI1B-203ENST00000554636 IGKV1D-43A0A0B4J1Z2 117 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 ELOVL7A1L3X0 281 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 NPIPB13A6NJU9 1138 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 AQP12BA6NM10 295 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 NPIPB4C9JG80 1138 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 INAFM1C9JVW0 142 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 NME4O00746 187 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 TNFRSF13BO14836 293 aaPredicted RBP3.56□□□□□ -1.84
VTI1B-203ENST00000554636 FFAR1O14842 300 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 ATP8B1O43520 1251 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 SSX4O60224 188 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 CCDC22O60826 627 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 TRMUO75648 421 aaKnown RBP3.56□□□□□ -1.84
VTI1B-203ENST00000554636 SERPINI2O75830 405 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 PDE5AO76074 875 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 HLA-HP01893 362 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 MT-ND1P03886 318 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 PGA4P0DJD7 388 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 PGA3P0DJD8 388 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 ADORA3P0DMS8 318 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 B4GALT1P15291 398 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 ZNF14P17017 642 aaPredicted RBP3.56□□□□□ -1.84
VTI1B-203ENST00000554636 AHCYP23526 432 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 KDELR2P33947 212 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 GRK5P34947 590 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 RBM34P42696 430 aaKnown RBP3.56□□□□□ -1.84
VTI1B-203ENST00000554636 OR1E2P47887 323 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 CSNK1A1P48729 337 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 GSK3BP49841 420 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 SLC7A2P52569 658 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 ZNF133P52736 654 aaPredicted RBP3.56□□□□□ -1.84
VTI1B-203ENST00000554636 BIDP55957 195 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 FAM3BP58499 235 aaPredicted RBP3.56□□□□□ -1.84
VTI1B-203ENST00000554636 TAS2R41P59536 307 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 RPL15P61313 204 aaKnown RBP3.56□□□□□ -1.84
VTI1B-203ENST00000554636 IL1RL1Q01638 556 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 LIPEQ05469 1076 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 RUNX1T1Q06455 604 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 RPL18Q07020 188 aaKnown RBP3.56□□□□□ -1.84
VTI1B-203ENST00000554636 NPRL3Q12980 569 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 ADIPOQQ15848 244 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 HSP90B2PQ58FF3 399 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 ARMC4Q5T2S8 1044 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 HACD2Q6Y1H2 254 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 SLC35D2Q76EJ3 337 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 SPATA21Q7Z572 469 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 NANOGNBQ7Z5D8 188 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 TSEN54Q7Z6J9 526 aaKnown RBP3.56□□□□□ -1.84
VTI1B-203ENST00000554636 VTCN1Q7Z7D3 282 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 ZNF584Q8IVC4 421 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 OFCC1Q8IZS5 231 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 ZNF525Q8N782 197 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 LRRC75AQ8NAA5 344 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 RBM15BQ8NDT2 890 aaKnown RBP3.56□□□□□ -1.84
VTI1B-203ENST00000554636 NOXO1Q8NFA2 376 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 OR4F15Q8NGB8 312 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 OR6X1Q8NH79 312 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms