RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 PPP1R3DO95685 299 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 NGFP01138 241 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 GASTP01350 101 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 SRD5A1P18405 259 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 GSTM3P21266 225 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 NOS3P29474 1203 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 MPV17P39210 176 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 GLO1Q04760 184 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 SLC3A1Q07837 685 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 CR1LQ2VPA4 569 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 HFEQ30201 348 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 SLC36A3Q495N2 470 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 ZMAT1Q5H9K5 638 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 SPATA46Q5T0L3 261 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 LEG1Q6P5S2 330 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 RFPL4BQ6ZWI9 263 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 CXXC5Q7LFL8 322 aaKnown RBP7.43□□□□□ -1.22
ACTN1-213ENST00000554508 TMEM179BQ7Z7N9 219 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 JAZF1Q86VZ6 243 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 GJC3Q8NFK1 279 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 OR5L1Q8NGL2 311 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 OR1F12Q8NHA8 337 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 CLDND2Q8NHS1 167 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 SPATA3Q8NHX4 192 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 PTP4A1Q93096 173 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 SAMD8Q96LT4 415 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 FEVQ99581 238 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 SOX7Q9BT81 388 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 IFT27Q9BW83 186 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 EGLN1Q9GZT9 426 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 SEMA6AQ9H2E6 1030 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 SAP30LQ9HAJ7 183 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 NTN4Q9HB63 628 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 S100A14Q9HCY8 104 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 SRA1Q9HD15 236 aaKnown RBP7.43□□□□□ -1.22
ACTN1-213ENST00000554508 ASH2LQ9UBL3 628 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 TMEFF2Q9UIK5 374 aaPredicted RBP7.43□□□□□ -1.22
ACTN1-213ENST00000554508 GRIP1Q9Y3R0 1128 aa7.43□□□□□ -1.22
ACTN1-213ENST00000554508 IGLV1-36A0A0B4J1U3 117 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 OR6C6A6NF89 314 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 CLDN25C9JDP6 229 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 G3V2T6 193 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 H3BNX3 289 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 SPRY3O43610 288 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 TIMM8AO60220 97 aaPredicted RBP7.42□□□□□ -1.22
ACTN1-213ENST00000554508 CDC14BO60729 498 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 MPZL1O95297 269 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 BAG2O95816 211 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 IGHV1-46P01743 117 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 CD55P08174 381 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 ANPEPP15144 967 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 HIST1H1CP16403 213 aaKnown RBP7.42□□□□□ -1.22
ACTN1-213ENST00000554508 KITLGP21583 273 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 PRKACGP22612 351 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 CENPAP49450 140 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 RGS6P49758 472 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 DVL1P1P54792 670 aaPredicted RBP7.42□□□□□ -1.22
ACTN1-213ENST00000554508 HIST1H3AP68431 136 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 PSG7Q13046 419 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 CDK5R2Q13319 367 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 TSTQ16762 297 aaKnown RBP7.42□□□□□ -1.22
ACTN1-213ENST00000554508 CCDC92Q53HC0 331 aaPredicted RBP7.42□□□□□ -1.22
ACTN1-213ENST00000554508 HIST2H3PS2Q5TEC6 136 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 ZNF770Q6IQ21 691 aaPredicted RBP7.42□□□□□ -1.22
ACTN1-213ENST00000554508 SHQ1Q6PI26 577 aaKnown RBP7.42□□□□□ -1.22
ACTN1-213ENST00000554508 ZNF620Q6ZNG0 422 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 USP51Q70EK9 711 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 HIST2H3AQ71DI3 136 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 ZBTB46Q86UZ6 589 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 HS3ST5Q8IZT8 346 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 OR6V1Q8N148 313 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 ATG16L2Q8NAA4 619 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 OR52L1Q8NGH7 329 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 OR4K13Q8NH42 304 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 OR5K1Q8NHB7 308 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 TMEM158Q8WZ71 300 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 RAB1CQ92928 201 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 HAVCR1Q96D42 359 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 TIMD4Q96H15 378 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 CENPNQ96H22 339 aaPredicted RBP7.42□□□□□ -1.22
ACTN1-213ENST00000554508 TSSK2Q96PF2 358 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 NMNAT3Q96T66 252 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 COQ7Q99807 217 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 PKP2Q99959 881 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 HDHD2Q9H0R4 259 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 ZNF556Q9HAH1 456 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 KIF17Q9P2E2 1029 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 POLR1DQ9Y2S0 133 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 STARD10Q9Y365 291 aa7.42□□□□□ -1.22
ACTN1-213ENST00000554508 ARHGAP32A7KAX9 2087 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 ARRDC5A6NEK1 342 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 SAC3D1A6NKF1 404 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 H0YHG0 523 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 DCTN6O00399 190 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 RER1O15258 196 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 GAAP10253 952 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 ANXA8P13928 327 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 RAC2P15153 192 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 TNFSF4P23510 183 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 LMO4P61968 165 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms