RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 SLC38A2Q96QD8 506 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 SNX18Q96RF0 628 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 IL4I1Q96RQ9 567 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 NMNAT3Q96T66 252 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 HCAR1Q9BXC0 346 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 NMNAT2Q9BZQ4 307 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 FN3KQ9H479 309 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 MED20Q9H944 212 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 HINT3Q9NQE9 182 aaKnown RBP5.52□□□□□ -1.53
SCFD1-212ENST00000554486 GLRX2Q9NS18 164 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 EMC3Q9P0I2 261 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 GRHPRQ9UBQ7 328 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 AASSQ9UDR5 926 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 KLHL21Q9UJP4 597 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 RALYQ9UKM9 306 aaKnown RBP5.52□□□□□ -1.53
SCFD1-212ENST00000554486 RAB26Q9ULW5 256 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 OSGIN2Q9Y236 505 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 RNF6Q9Y252 685 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 RCE1Q9Y256 329 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 GPR52Q9Y2T5 361 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 NOSIPQ9Y314 301 aaKnown RBP5.52□□□□□ -1.53
SCFD1-212ENST00000554486 MEMO1Q9Y316 297 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 LRRC42Q9Y546 428 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 PCDHGB5Q9Y5G0 923 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 MYO18BQ8IUG5 2567 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 TRGV8A0A0C4DH27 118 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 CCDC182A6NF36 153 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 FAM183AA6NL82 134 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 ZNF726A6NNF4 738 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 RIIAD1A6NNX1 92 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 CENPBD1B2RD01 187 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 DCTN6O00399 190 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 XKRYO14609 159 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 DENRO43583 198 aaKnown RBP5.51□□□□□ -1.53
SCFD1-212ENST00000554486 TLX2O43763 284 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-212ENST00000554486 AHCYL1O43865 530 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 WBP4O75554 376 aaKnown RBP5.51□□□□□ -1.53
SCFD1-212ENST00000554486 UPK3AO75631 287 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 RENP00797 406 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 CGAP01215 116 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 IFNGP01579 166 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 IGHG1P01857 330 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 CSTBP04080 98 aaKnown RBP5.51□□□□□ -1.53
SCFD1-212ENST00000554486 CRHP06850 196 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 CLUP10909 449 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 CTLA4P16410 223 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 ZNF3P17036 446 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 SLC2A5P22732 501 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 OR3A2P47893 321 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 ZNF133P52736 654 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-212ENST00000554486 SLC25A1P53007 311 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 CASP6P55212 293 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 TPTEP56180 551 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 CDC42P60953 191 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 SNRPGP62308 76 aaKnown RBP5.51□□□□□ -1.53
SCFD1-212ENST00000554486 IL5RAQ01344 420 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 IL18R1Q13478 541 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 ETFDHQ16134 617 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 TSPO2Q5TGU0 170 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 AADACL4Q5VUY2 407 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 FAM90A2PQ658T7 463 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 PLBD1Q6P4A8 553 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 SLC25A47Q6Q0C1 308 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 TFAP2EQ6VUC0 442 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 HDDC2Q7Z4H3 204 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 C8orf59Q8N0T1 100 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-212ENST00000554486 OR6V1Q8N148 313 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 BBS1Q8NFJ9 593 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 OR8J1Q8NGP2 316 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 OR9Q1Q8NGQ5 310 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 CNIH3Q8TBE1 160 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 TMEM163Q8TC26 289 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 APH1BQ8WW43 257 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 ZNRF4Q8WWF5 429 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 TRUB1Q8WWH5 349 aaKnown RBP5.51□□□□□ -1.53
SCFD1-212ENST00000554486 STARD4Q96DR4 205 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 PLEKHA8Q96JA3 519 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 LRR1Q96L50 414 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 ADAD1Q96M93 576 aaKnown RBP5.51□□□□□ -1.53
SCFD1-212ENST00000554486 ZNF582Q96NG8 517 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-212ENST00000554486 ZFP3Q96NJ6 502 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 APOL4Q9BPW4 351 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 ALG12Q9BV10 488 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 DPCDQ9BVM2 203 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-212ENST00000554486 TEX12Q9BXU0 123 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 ANKRD60Q9BZ19 345 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 PRRG3Q9BZD7 231 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 SYT4Q9H2B2 425 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 KLK15Q9H2R5 256 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 SLCO5A1Q9H2Y9 848 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 RASSF1Q9NS23 344 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 SLC7A10Q9NS82 523 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 ASB6Q9NWX5 421 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 IMPAD1Q9NX62 359 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 GLTPQ9NZD2 209 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 DNAJC27Q9NZQ0 273 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 STEAP1Q9UHE8 339 aa5.51□□□□□ -1.53
SCFD1-212ENST00000554486 IGLV1-36A0A0B4J1U3 117 aa5.5□□□□□ -1.53
SCFD1-212ENST00000554486 PRR23D1E9PI22 279 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-212ENST00000554486 M0R3G1 203 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms