RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 CXorf40BQ96DE9 158 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 WDR34Q96EX3 536 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 ZFP3Q96NJ6 502 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 DCLRE1CQ96SD1 692 aaKnown RBP2.4□□□□□ -2.02
PRPF39-206ENST00000554429 ZNF184Q99676 751 aaPredicted RBP2.4□□□□□ -2.02
PRPF39-206ENST00000554429 NKX3-1Q99801 234 aaPredicted RBP2.4□□□□□ -2.02
PRPF39-206ENST00000554429 BTBD10Q9BSF8 475 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 TMEM208Q9BTX3 173 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 UGT2B28Q9BY64 529 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 ULBP3Q9BZM4 244 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 ING2Q9H160 280 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 DHX35Q9H5Z1 703 aaKnown RBP2.4□□□□□ -2.02
PRPF39-206ENST00000554429 C1orf109Q9NX04 203 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 ARL15Q9NXU5 204 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 P2RX2Q9UBL9 471 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 SS18L2Q9UHA2 77 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 CD84Q9UIB8 345 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 RARRES3Q9UL19 164 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 EMCNQ9ULC0 261 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 PCYT1BQ9Y5K3 369 aaPredicted RBP2.4□□□□□ -2.02
PRPF39-206ENST00000554429 HEBP2Q9Y5Z4 205 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 CDH10Q9Y6N8 788 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 TLN1Q9Y490 2541 aaKnown RBP2.4□□□□□ -2.02
PRPF39-206ENST00000554429 TRBV11-1A0A0K0K1C0 115 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ATP6AP2A0A1C7CYW4 349 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 FEZF1A0PJY2 475 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 TVP23AA6NH52 213 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 C17orf100A8MU93 164 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 J3QRK9 145 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 TCF21O43680 179 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ATP6AP2O75787 350 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 CYP7B1O75881 506 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 AGFG2O95081 481 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 MPIG6BO95866 241 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 IFNW1P05000 195 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 IFNA4P05014 189 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 S100A8P05109 93 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 CT62P0C5K7 136 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 SPP1P10451 314 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 RAB6AP20340 208 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 IDSP22304 550 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ARR3P36575 388 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 MAGEA12P43365 314 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 OR3A1P47881 315 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 CYB561P49447 251 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 PTTG1IPP53801 180 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 OR4D2P58180 307 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 MAXP61244 160 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 RPS7P62081 194 aaKnown RBP2.4□□□□□ -2.03
PRPF39-206ENST00000554429 RAE1P78406 368 aaKnown RBP2.4□□□□□ -2.03
PRPF39-206ENST00000554429 APOFQ13790 326 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 TAB1Q15750 504 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 HAGHQ16775 308 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 SLC35D3Q5M8T2 416 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF648Q5T619 568 aaPredicted RBP2.4□□□□□ -2.03
PRPF39-206ENST00000554429 METRNLQ641Q3 311 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 OR8G2PQ6IF36 304 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 TMEM65Q6PI78 240 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ATRAIDQ6UW56 229 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 DCDC5Q6ZRR9 648 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ACOT7LQ6ZUV0 252 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ATG4DQ86TL0 474 aaPredicted RBP2.4□□□□□ -2.03
PRPF39-206ENST00000554429 PTOV1Q86YD1 416 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 RAB43Q86YS6 212 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF547Q8IVP9 402 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 TP53INP2Q8IXH6 220 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 CLIP4Q8N3C7 705 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 CADM2Q8N3J6 435 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 NPEPL1Q8NDH3 523 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ABHD5Q8WTS1 349 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 PATE1Q8WXA2 126 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 BAALCQ8WXS3 180 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 SCAMP4Q969E2 229 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 FBXL8Q96CD0 374 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 NTNG2Q96CW9 530 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 C10orf35Q96D05 121 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 MSI2Q96DH6 328 aaKnown RBP2.4□□□□□ -2.03
PRPF39-206ENST00000554429 MRPL53Q96EL3 112 aaKnown RBP2.4□□□□□ -2.03
PRPF39-206ENST00000554429 IMP4Q96G21 291 aaKnown RBP2.4□□□□□ -2.03
PRPF39-206ENST00000554429 VSTM2LQ96N03 204 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 NEDD4LQ96PU5 975 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 OR2V2Q96R30 315 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 OR6C1Q96RD1 312 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 DOK1Q99704 481 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 MICU1Q9BPX6 476 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 TCEAL7Q9BRU2 100 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 PCGF1Q9BSM1 259 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 RIOK2Q9BVS4 552 aaKnown RBP2.4□□□□□ -2.03
PRPF39-206ENST00000554429 CDCA4Q9BXL8 241 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 AMBRA1Q9C0C7 1298 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 PIGMQ9H3S5 423 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 FAM83DQ9H4H8 585 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 RDH14Q9HBH5 336 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 EQTNQ9NQ60 294 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 MIEF1Q9NQG6 463 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 GAR1Q9NY12 217 aaKnown RBP2.4□□□□□ -2.03
PRPF39-206ENST00000554429 DHCR7Q9UBM7 475 aaKnown RBP2.4□□□□□ -2.03
PRPF39-206ENST00000554429 GPR160Q9UJ42 338 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 POMT2Q9UKY4 750 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF490Q9ULM2 529 aaPredicted RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms