RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 MAPK11Q15759 364 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 SRSF7Q16629 238 aaKnown RBP eCLIP4.82□□□□□ -1.64
ATXN3-226ENST00000554350 DUSP7Q16829 419 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 RGS21Q2M5E4 152 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 TMEM44Q2T9K0 475 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 ZNF628Q5EBL2 1059 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 ARMCX4Q5H9R4 360 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 ENTPD8Q5MY95 495 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 TIMM23BQ5SRD1 257 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 C12orf73Q69YU5 71 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 C16orf87Q6PH81 154 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 ZNF66Q6ZN08 573 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 DCDC5Q6ZRR9 648 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 NUFIP2Q7Z417 695 aaKnown RBP4.82□□□□□ -1.64
ATXN3-226ENST00000554350 ZNF554Q86TJ5 538 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 C7orf57Q8NEG2 295 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 OR2L5Q8NG80 312 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 GPR32P1Q8NGA4 272 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 OR8J1Q8NGP2 316 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 OR10D3Q8NH80 312 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 HGDQ93099 445 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 MAL2Q969L2 176 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 CIDECQ96AQ7 238 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-226ENST00000554350 OMA1Q96E52 524 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 TMEM19Q96HH6 336 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 AMDHD1Q96NU7 426 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 F2RL3Q96RI0 385 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 TBX15Q96SF7 602 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 NIPSNAP1Q9BPW8 284 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 SLC30A2Q9BRI3 323 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 SLIRPQ9GZT3 109 aaKnown RBP4.82□□□□□ -1.64
ATXN3-226ENST00000554350 NMNAT1Q9HAN9 279 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-226ENST00000554350 SLC25A19Q9HC21 320 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 ISYNA1Q9NPH2 558 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 G6PC2Q9NQR9 355 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 CLN6Q9NWW5 311 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 IMPAD1Q9NX62 359 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 MS4A12Q9NXJ0 267 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 CCDC59Q9P031 241 aaKnown RBP4.82□□□□□ -1.64
ATXN3-226ENST00000554350 SEC14L4Q9UDX3 406 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 OSGIN1Q9UJX0 560 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 FBXO9Q9UK97 447 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-226ENST00000554350 SLC9A8Q9Y2E8 581 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 MRPS18CQ9Y3D5 142 aaKnown RBP4.82□□□□□ -1.64
ATXN3-226ENST00000554350 RPL36Q9Y3U8 105 aaKnown RBP4.82□□□□□ -1.64
ATXN3-226ENST00000554350 ASB4Q9Y574 426 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 PLXNB1O43157 2135 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 RYR2Q92736 4967 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 A0A075B6Q4 140 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 PNMA8CA0A1B0GUJ8 204 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 CIB4A0PJX0 185 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 CLPSL1A2RUU4 121 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 OR2M5A3KFT3 312 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 PRSS29PA6NIE9 313 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 OR5H1A6NKK0 313 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 SNTNA6NMZ2 147 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 C17orf51A8MQB3 221 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 EFCAB9A8MZ26 197 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 J3QLI3 93 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 FFAR1O14842 300 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 SCO2O43819 266 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 TMPRSS11DO60235 418 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 PRKRAO75569 313 aaKnown RBP4.81□□□□□ -1.64
ATXN3-226ENST00000554350 REM1O75628 298 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 DIRAS1O95057 198 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 C1QCP02747 245 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 OPN1MWP04001 364 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 OPN1MW2P0DN77 364 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 OPN1MW3P0DN78 364 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 CSNK2A2P19784 350 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-226ENST00000554350 HIST1H1TP22492 207 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-226ENST00000554350 ATP5A1P25705 553 aaKnown RBP4.81□□□□□ -1.64
ATXN3-226ENST00000554350 PSMB9P28065 219 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 EPHA2P29317 976 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 AQP1P29972 269 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 IFNA8P32881 189 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 SOAT1P35610 550 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 SERPINF1P36955 418 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 RGS6P49758 472 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 UGT2B15P54855 530 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 EFNB1P98172 346 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 PRKCDQ05655 676 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 SLAMF1Q13291 335 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 TIGD6Q17RP2 521 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 ZNF404Q494X3 552 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 ZNF626Q68DY1 528 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 ACSM5Q6NUN0 579 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 SLC48A1Q6P1K1 146 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 C1orf94Q6P1W5 598 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 ZCCHC12Q6PEW1 402 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 AHSA2Q719I0 299 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 SSX8Q7RTT4 187 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 GALNT10Q86SR1 603 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 TUSC5Q8IXB3 177 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 ZCCHC24Q8N2G6 241 aaKnown RBP4.81□□□□□ -1.64
ATXN3-226ENST00000554350 STX19Q8N4C7 294 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 TMCO5AQ8N6Q1 288 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 CLDN22Q8N7P3 220 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 AQP11Q8NBQ7 271 aa4.81□□□□□ -1.64
ATXN3-226ENST00000554350 PROKR2Q8NFJ6 384 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms