RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 GMNCA6NCL1 334 aa11.29□□□□□ -0.6
PRPF39-204ENST00000553605 PRORSD1PA6NEY8 169 aa11.29□□□□□ -0.6
PRPF39-204ENST00000553605 C12orf71A8MTZ7 269 aa11.29□□□□□ -0.6
PRPF39-204ENST00000553605 NDUFA2O43678 99 aa11.29□□□□□ -0.6
PRPF39-204ENST00000553605 FAM20BO75063 409 aa11.29□□□□□ -0.6
PRPF39-204ENST00000553605 SPAG7O75391 227 aa11.29□□□□□ -0.6
PRPF39-204ENST00000553605 BPGMP07738 259 aa11.29□□□□□ -0.6
PRPF39-204ENST00000553605 NR2C1P13056 603 aa11.29□□□□□ -0.6
PRPF39-204ENST00000553605 HTR5AP47898 357 aa11.29□□□□□ -0.6
PRPF39-204ENST00000553605 RPL18Q07020 188 aaKnown RBP11.29□□□□□ -0.6
PRPF39-204ENST00000553605 MAB21L1Q13394 359 aa11.29□□□□□ -0.6
PRPF39-204ENST00000553605 ENDOGQ14249 297 aaKnown RBP11.29□□□□□ -0.6
PRPF39-204ENST00000553605 LY6EQ16553 131 aa11.29□□□□□ -0.6
PRPF39-204ENST00000553605 C11orf91Q3C1V1 193 aa11.29□□□□□ -0.6
PRPF39-204ENST00000553605 CLEC12AQ5QGZ9 265 aa11.29□□□□□ -0.6
PRPF39-204ENST00000553605 OGFOD2Q6N063 350 aa11.29□□□□□ -0.6
PRPF39-204ENST00000553605 SLC30A8Q8IWU4 369 aa11.29□□□□□ -0.6
PRPF39-204ENST00000553605 CLDN22Q8N7P3 220 aa11.29□□□□□ -0.6
PRPF39-204ENST00000553605 PAPD5Q8NDF8 572 aaKnown RBP11.29□□□□□ -0.6
PRPF39-204ENST00000553605 NFKBIDQ8NI38 313 aa11.29□□□□□ -0.6
PRPF39-204ENST00000553605 MCHR1Q99705 422 aa11.29□□□□□ -0.6
PRPF39-204ENST00000553605 INIPQ9NRY2 104 aa11.29□□□□□ -0.6
PRPF39-204ENST00000553605 TMEM100Q9NV29 134 aa11.29□□□□□ -0.6
PRPF39-204ENST00000553605 PTTG3PQ9NZH4 202 aa11.29□□□□□ -0.6
PRPF39-204ENST00000553605 RPUSD1Q9UJJ7 312 aaKnown RBP11.29□□□□□ -0.6
PRPF39-204ENST00000553605 MEIOCA2RUB1 952 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 LGALS8O00214 317 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 CLIC1O00299 241 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 DOK2O60496 412 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 HLA-DPB1P04440 258 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 FPR3P25089 353 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 RPL14P50914 215 aaKnown RBP11.28□□□□□ -0.6
PRPF39-204ENST00000553605 PRB3Q04118 309 aaPredicted RBP11.28□□□□□ -0.6
PRPF39-204ENST00000553605 FADDQ13158 208 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 CASC10Q5T4H9 136 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 REEP3Q6NUK4 255 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 FBXW12Q6X9E4 464 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 C10orf111Q8N326 155 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 CELF2-AS1Q8N7Q2 184 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 PCYOX1LQ8NBM8 494 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 BHLHE23Q8NDY6 225 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 ITCHQ96J02 903 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 RBP7Q96R05 134 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 SSX3Q99909 188 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 FAM234AQ9H0X4 552 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 RAD21L1Q9H4I0 556 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 RMND5AQ9H871 391 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 EVA1AQ9H8M9 152 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 RAB18Q9NP72 206 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 SIRT7Q9NRC8 400 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 UFSP2Q9NUQ7 469 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 ONECUT1Q9UBC0 465 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 DNAJB11Q9UBS4 358 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 ANGPT4Q9Y264 503 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 RAP2CQ9Y3L5 183 aa11.28□□□□□ -0.6
PRPF39-204ENST00000553605 A0A1W2PPL8 197 aa11.27□□□□□ -0.61
PRPF39-204ENST00000553605 DVL1O14640 695 aa11.27□□□□□ -0.61
PRPF39-204ENST00000553605 FCN3O75636 299 aa11.27□□□□□ -0.61
PRPF39-204ENST00000553605 THY1P04216 161 aa11.27□□□□□ -0.61
PRPF39-204ENST00000553605 MSR1P21757 451 aa11.27□□□□□ -0.61
PRPF39-204ENST00000553605 SAA4P35542 130 aa11.27□□□□□ -0.61
PRPF39-204ENST00000553605 RPL4P36578 427 aaKnown RBP11.27□□□□□ -0.61
PRPF39-204ENST00000553605 AQP2P41181 271 aa11.27□□□□□ -0.61
PRPF39-204ENST00000553605 SLC35A2P78381 396 aa11.27□□□□□ -0.61
PRPF39-204ENST00000553605 OR8B8Q15620 311 aa11.27□□□□□ -0.61
PRPF39-204ENST00000553605 MPPED2Q15777 294 aa11.27□□□□□ -0.61
PRPF39-204ENST00000553605 WHAMMP3Q1A5X7 153 aa11.27□□□□□ -0.61
PRPF39-204ENST00000553605 C6orf10Q5SRN2 563 aa11.27□□□□□ -0.61
PRPF39-204ENST00000553605 FOXL2NBQ6ZUU3 175 aa11.27□□□□□ -0.61
PRPF39-204ENST00000553605 IFT20Q8IY31 132 aa11.27□□□□□ -0.61
PRPF39-204ENST00000553605 BOLLQ8N9W6 283 aaKnown RBP11.27□□□□□ -0.61
PRPF39-204ENST00000553605 BEND2Q8NDZ0 799 aa11.27□□□□□ -0.61
PRPF39-204ENST00000553605 OR5L1Q8NGL2 311 aa11.27□□□□□ -0.61
PRPF39-204ENST00000553605 SLC7A6Q92536 515 aa11.27□□□□□ -0.61
PRPF39-204ENST00000553605 RASD2Q96D21 266 aa11.27□□□□□ -0.61
PRPF39-204ENST00000553605 RCC1LQ96I51 464 aaKnown RBP11.27□□□□□ -0.61
PRPF39-204ENST00000553605 ZNF583Q96ND8 569 aa11.27□□□□□ -0.61
PRPF39-204ENST00000553605 WACQ9BTA9 647 aa11.27□□□□□ -0.61
PRPF39-204ENST00000553605 NPFFR1Q9GZQ6 430 aa11.27□□□□□ -0.61
PRPF39-204ENST00000553605 GAR1Q9NY12 217 aaKnown RBP11.27□□□□□ -0.61
PRPF39-204ENST00000553605 RNF7Q9UBF6 113 aa11.27□□□□□ -0.61
PRPF39-204ENST00000553605 TRAV38-1A0A0B4J264 116 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 A0A1B0GWJ7 208 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 WDR91A4D1P6 747 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 CPSF4LA6NMK7 179 aaKnown RBP11.26□□□□□ -0.61
PRPF39-204ENST00000553605 IQCF6A8MYZ5 107 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 M0R3H8 397 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 FBP2O00757 339 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 SGCEO43556 437 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 SLC22A3O75751 556 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 LYPD3O95274 346 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 DUS4LO95620 317 aaKnown RBP11.26□□□□□ -0.61
PRPF39-204ENST00000553605 GYPAP02724 150 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 FAHP16930 419 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 ZNF26P17031 533 aaPredicted RBP11.26□□□□□ -0.61
PRPF39-204ENST00000553605 FUT1P19526 365 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 RAD23AP54725 363 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 DLX1P56177 255 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 ABCE1P61221 599 aaKnown RBP11.26□□□□□ -0.61
PRPF39-204ENST00000553605 CDK6Q00534 326 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms