RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 UBTD1Q9HAC8 227 aa4.09□□□□□ -1.75
ATXN3-222ENST00000553570 NANSQ9NR45 359 aa4.09□□□□□ -1.75
ATXN3-222ENST00000553570 NDE1Q9NXR1 346 aa4.09□□□□□ -1.75
ATXN3-222ENST00000553570 SEC14L4Q9UDX3 406 aa4.09□□□□□ -1.75
ATXN3-222ENST00000553570 KCNN3Q9UGI6 736 aa4.09□□□□□ -1.75
ATXN3-222ENST00000553570 RASD1Q9Y272 281 aa4.09□□□□□ -1.75
ATXN3-222ENST00000553570 LRBAP50851 2863 aa4.09□□□□□ -1.75
ATXN3-222ENST00000553570 RELNP78509 3460 aa4.09□□□□□ -1.76
ATXN3-222ENST00000553570 YLPM1P49750 1951 aaKnown RBP4.09□□□□□ -1.76
ATXN3-222ENST00000553570 ROS1P08922 2347 aa4.09□□□□□ -1.76
ATXN3-222ENST00000553570 DOPEY1Q5JWR5 2465 aa4.09□□□□□ -1.76
ATXN3-222ENST00000553570 FLNBO75369 2602 aaKnown RBP4.08□□□□□ -1.76
ATXN3-222ENST00000553570 CELSR2Q9HCU4 2923 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 A0A0B4J2E0 115 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 A0A1B0GX12 115 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 A0A1W2PQ09 198 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 ZNF724A8MTY0 619 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 MS4A18H0YCH9 400 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 M0R1B8 84 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 M0R3G1 203 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 GNGT2O14610 69 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 CLOCKO15516 846 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 CHP2O43745 196 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 TMCC2O75069 709 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 PDE5AO76074 875 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 VAMP5O95183 116 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 BGLAPP02818 100 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 LCATP04180 440 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 SAGP10523 405 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-222ENST00000553570 GGT1P19440 569 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 CALB2P22676 271 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 IGHV1-2P23083 117 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 EDNRAP25101 427 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 CHATP28329 748 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 RPL4P36578 427 aaKnown RBP4.08□□□□□ -1.76
ATXN3-222ENST00000553570 OR3A2P47893 321 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 ERFP50548 548 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 BIDP55957 195 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 CBX1P83916 185 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 MYBPC1Q00872 1141 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 POU3F1Q03052 451 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-222ENST00000553570 EGR4Q05215 589 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 LTBQ06643 244 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 LGALS3BPQ08380 585 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 ST3GAL3Q11203 375 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 CAMK2DQ13557 499 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 TRAM2Q15035 370 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 MS4A18Q3C1V0 323 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 FGD3Q5JSP0 725 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 TSPO2Q5TGU0 170 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 FBXW9Q5XUX1 488 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 TBPL2Q6SJ96 375 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 C5orf46Q6UWT4 87 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 STAC2Q6ZMT1 411 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 CREB3L2Q70SY1 520 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 TRPM8Q7Z2W7 1104 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 NANOGNBQ7Z5D8 188 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 DHFR2Q86XF0 187 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 PGAM4Q8N0Y7 254 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 OR51A7Q8NH64 312 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 PFN4Q8NHR9 129 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 TMEM255BQ8WV15 326 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 TMEM239Q8WW34 195 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 HSD17B8Q92506 261 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 SLC35B4Q969S0 331 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 SGTBQ96EQ0 304 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 PYURFQ96I23 114 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 TXNDC15Q96J42 360 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 LURAP1Q96LR2 239 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 DACH2Q96NX9 599 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 ZNF385AQ96PM9 386 aaKnown RBP4.08□□□□□ -1.76
ATXN3-222ENST00000553570 LIME1Q9H400 295 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 RERGLQ9H628 205 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 ESRP2Q9H6T0 727 aaKnown RBP4.08□□□□□ -1.76
ATXN3-222ENST00000553570 NGBQ9NPG2 151 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 KRCC1Q9NPI7 259 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-222ENST00000553570 B3GAT2Q9NPZ5 323 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 SLC7A10Q9NS82 523 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 MED29Q9NX70 200 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 POU2F3Q9UKI9 436 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 PRDM4Q9UKN5 801 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 TMCC3Q9ULS5 477 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 SAMD4AQ9UPU9 718 aaKnown RBP4.08□□□□□ -1.76
ATXN3-222ENST00000553570 AURKCQ9UQB9 309 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 POFUT2Q9Y2G5 429 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 MED31Q9Y3C7 131 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 FLVCR1Q9Y5Y0 555 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 GMEB1Q9Y692 573 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 SESN1Q9Y6P5 492 aa4.08□□□□□ -1.76
ATXN3-222ENST00000553570 CREBBPQ92793 2442 aa4.07□□□□□ -1.76
ATXN3-222ENST00000553570 PRRC2AP48634 2157 aaKnown RBP4.07□□□□□ -1.76
ATXN3-222ENST00000553570 DOCK11Q5JSL3 2073 aa4.07□□□□□ -1.76
ATXN3-222ENST00000553570 IGKV1D-42A0A075B6H8 117 aa4.07□□□□□ -1.76
ATXN3-222ENST00000553570 A0A1W2PRG6 482 aa4.07□□□□□ -1.76
ATXN3-222ENST00000553570 ENO4A6NNW6 628 aa4.07□□□□□ -1.76
ATXN3-222ENST00000553570 ZNF716A6NP11 495 aa4.07□□□□□ -1.76
ATXN3-222ENST00000553570 EFCAB9A8MZ26 197 aa4.07□□□□□ -1.76
ATXN3-222ENST00000553570 ZNF587BE7ETH6 402 aa4.07□□□□□ -1.76
ATXN3-222ENST00000553570 PLPP3O14495 311 aa4.07□□□□□ -1.76
ATXN3-222ENST00000553570 FMO6PO60774 539 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms