RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 TMEM155Q4W5P6 130 aa12.78□□□□□ -0.36
SDR39U1-205ENST00000553546 SAMD4BQ5PRF9 694 aaKnown RBP12.78□□□□□ -0.36
SDR39U1-205ENST00000553546 SLC27A4Q6P1M0 643 aa12.78□□□□□ -0.36
SDR39U1-205ENST00000553546 C1orf94Q6P1W5 598 aa12.78□□□□□ -0.36
SDR39U1-205ENST00000553546 FBXW12Q6X9E4 464 aa12.78□□□□□ -0.36
SDR39U1-205ENST00000553546 C1orf229Q6ZS94 237 aaPredicted RBP12.78□□□□□ -0.36
SDR39U1-205ENST00000553546 CPLX4Q7Z7G2 160 aa12.78□□□□□ -0.36
SDR39U1-205ENST00000553546 PGAM4Q8N0Y7 254 aa12.78□□□□□ -0.36
SDR39U1-205ENST00000553546 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.78□□□□□ -0.36
SDR39U1-205ENST00000553546 SLC7A6Q92536 515 aa12.78□□□□□ -0.36
SDR39U1-205ENST00000553546 APOBEC3DQ96AK3 386 aaPredicted RBP12.78□□□□□ -0.36
SDR39U1-205ENST00000553546 NSMCE2Q96MF7 247 aa12.78□□□□□ -0.36
SDR39U1-205ENST00000553546 SUCNR1Q9BXA5 334 aa12.78□□□□□ -0.36
SDR39U1-205ENST00000553546 OR52D1Q9H346 318 aa12.78□□□□□ -0.36
SDR39U1-205ENST00000553546 NDE1Q9NXR1 346 aa12.78□□□□□ -0.36
SDR39U1-205ENST00000553546 PPP1R3CQ9UQK1 317 aa12.78□□□□□ -0.36
SDR39U1-205ENST00000553546 V9GYQ6 96 aa12.78□□□□□ -0.36
SDR39U1-205ENST00000553546 IGLV1-36A0A0B4J1U3 117 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 TRIM77I1YAP6 450 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 OR10H3O60404 316 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 AVPP01185 164 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 FABP3P05413 133 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 SBK2P0C263 348 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 NOS3P29474 1203 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 BTG1P62324 171 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 HIST1H3AP68431 136 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 LCN2P80188 198 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 COX10Q12887 443 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 RFX4Q33E94 735 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 SLC36A3Q495N2 470 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 SPATS1Q496A3 300 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 HIST2H3PS2Q5TEC6 136 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 LEG1Q6P5S2 330 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 C12orf54Q6X4T0 127 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 Q6ZR03 302 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 HIST2H3AQ71DI3 136 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 ITLN1Q8WWA0 313 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 OR2V2Q96R30 315 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 GPA33Q99795 319 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 C7orf69Q9H7B7 122 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 TMCC3Q9ULS5 477 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 LHFPL6Q9Y693 200 aa12.77□□□□□ -0.37
SDR39U1-205ENST00000553546 IDH3BO43837 385 aa12.76□□□□□ -0.37
SDR39U1-205ENST00000553546 DBHP09172 617 aa12.76□□□□□ -0.37
SDR39U1-205ENST00000553546 CPT2P23786 658 aa12.76□□□□□ -0.37
SDR39U1-205ENST00000553546 ACTG1P63261 375 aa12.76□□□□□ -0.37
SDR39U1-205ENST00000553546 ECH1Q13011 328 aa12.76□□□□□ -0.37
SDR39U1-205ENST00000553546 SPRNQ5BIV9 151 aa12.76□□□□□ -0.37
SDR39U1-205ENST00000553546 OTPQ5XKR4 325 aa12.76□□□□□ -0.37
SDR39U1-205ENST00000553546 ZNF771Q7L3S4 317 aaPredicted RBP12.76□□□□□ -0.37
SDR39U1-205ENST00000553546 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.76□□□□□ -0.37
SDR39U1-205ENST00000553546 MUC20Q8N307 709 aaPredicted RBP12.76□□□□□ -0.37
SDR39U1-205ENST00000553546 BPIFB2Q8N4F0 458 aa12.76□□□□□ -0.37
SDR39U1-205ENST00000553546 OR8G5Q8NG78 346 aa12.76□□□□□ -0.37
SDR39U1-205ENST00000553546 OR13G1Q8NGZ3 307 aa12.76□□□□□ -0.37
SDR39U1-205ENST00000553546 ZNF582Q96NG8 517 aaPredicted RBP12.76□□□□□ -0.37
SDR39U1-205ENST00000553546 TSSK2Q96PF2 358 aa12.76□□□□□ -0.37
SDR39U1-205ENST00000553546 IFT27Q9BW83 186 aa12.76□□□□□ -0.37
SDR39U1-205ENST00000553546 RBM4Q9BWF3 364 aaKnown RBP12.76□□□□□ -0.37
SDR39U1-205ENST00000553546 PATZ1Q9HBE1 687 aaKnown RBP12.76□□□□□ -0.37
SDR39U1-205ENST00000553546 PTTG3PQ9NZH4 202 aa12.76□□□□□ -0.37
SDR39U1-205ENST00000553546 B9D1Q9UPM9 204 aa12.76□□□□□ -0.37
SDR39U1-205ENST00000553546 DCTN6O00399 190 aa12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 ARPC2O15144 300 aa12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 KCNAB3O43448 404 aa12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 SELEP16581 610 aa12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 FPR2P25090 351 aa12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 MDH2P40926 338 aaKnown RBP12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 SRP9P49458 86 aaKnown RBP12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 MEP1BQ16820 701 aa12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 RPL13AP3Q6NVV1 102 aa12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 C16orf89Q6UX73 402 aa12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 ZBTB46Q86UZ6 589 aa12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 LRRC28Q86X40 367 aaPredicted RBP12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 OR5AS1Q8N127 324 aa12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 OR6V1Q8N148 313 aa12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 ATG16L2Q8NAA4 619 aa12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 SLC26A10Q8NG04 563 aa12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 OR2AJ1Q8NGZ0 328 aa12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 GNPDA2Q8TDQ7 276 aa12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 FAM216AQ8WUB2 273 aa12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 POP5Q969H6 163 aaKnown RBP12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 NMNAT3Q96T66 252 aa12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 HCAR1Q9BXC0 346 aa12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 SRA1Q9HD15 236 aaKnown RBP12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 IL1RAPQ9NPH3 570 aa12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 RPRD1BQ9NQG5 326 aaKnown RBP12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 DCAF16Q9NXF7 216 aa12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 CD300AQ9UGN4 299 aa12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 TAGLN3Q9UI15 199 aa12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 POLR3KQ9Y2Y1 108 aaPredicted RBP12.75□□□□□ -0.37
SDR39U1-205ENST00000553546 A8MXK9 166 aa12.74□□□□□ -0.37
SDR39U1-205ENST00000553546 IQCF6A8MYZ5 107 aa12.74□□□□□ -0.37
SDR39U1-205ENST00000553546 TMEM178BH3BS89 294 aa12.74□□□□□ -0.37
SDR39U1-205ENST00000553546 DCTN3O75935 186 aa12.74□□□□□ -0.37
SDR39U1-205ENST00000553546 GPANK1O95872 356 aa12.74□□□□□ -0.37
SDR39U1-205ENST00000553546 HIST1H1CP16403 213 aaKnown RBP12.74□□□□□ -0.37
SDR39U1-205ENST00000553546 ADRA2CP18825 462 aa12.74□□□□□ -0.37
SDR39U1-205ENST00000553546 RRM2P31350 389 aa12.74□□□□□ -0.37
SDR39U1-205ENST00000553546 GSSP48637 474 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms