RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 POMT1Q9Y6A1 747 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 TRBV5-3A0A0A0MS03 114 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 KIR2DS1A0A191URI9 304 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 G3V4G9 280 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 HDAC3O15379 428 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 TIMM8AO60220 97 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-219ENST00000553488 TRMUO75648 421 aaKnown RBP6.04□□□□□ -1.44
ATXN3-219ENST00000553488 OR6A2O95222 327 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 MPIG6BO95866 241 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 TSPAN19P0C672 248 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 RPS2P15880 293 aaKnown RBP6.04□□□□□ -1.44
ATXN3-219ENST00000553488 TNFRSF1AP19438 455 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 KITLGP21583 273 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 CPT2P23786 658 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 GDI2P50395 445 aaKnown RBP6.04□□□□□ -1.44
ATXN3-219ENST00000553488 ERFP50548 548 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 POLR2JP52435 117 aaKnown RBP6.04□□□□□ -1.44
ATXN3-219ENST00000553488 UGT2B15P54855 530 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 FGF12P61328 243 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 ERVK-25P63136 954 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 RPL18Q07020 188 aaKnown RBP6.04□□□□□ -1.44
ATXN3-219ENST00000553488 PDCD1Q15116 288 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 CEP85LQ5SZL2 805 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 ARMC4Q5T2S8 1044 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 LRIF1Q5T3J3 769 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 BTNL3Q6UXE8 466 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 UNQ6126/PRO20091Q6UXV3 157 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 FOXL2NBQ6ZUU3 175 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 NANOGNBQ7Z5D8 188 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 RANBP3LQ86VV4 465 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-219ENST00000553488 KRT73Q86Y46 540 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 FITM2Q8N6M3 262 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 HIPK4Q8NE63 616 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 GPR32P1Q8NGA4 272 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 OR4D11Q8NGI4 311 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 OR6T1Q8NGN1 323 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 VANGL1Q8TAA9 524 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-219ENST00000553488 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.04□□□□□ -1.44
ATXN3-219ENST00000553488 CLUHP3Q96NS8 147 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 OR2V2Q96R30 315 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 MCHR1Q99705 422 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 SPATA5L1Q9BVQ7 753 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 SLC19A3Q9BZV2 496 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 ROPN1BQ9BZX4 212 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-219ENST00000553488 EVA1AQ9H8M9 152 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 ROPN1Q9HAT0 212 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-219ENST00000553488 SMURF2Q9HAU4 748 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 TMEM165Q9HC07 324 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 CCNB1IP1Q9NPC3 277 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 MEPEQ9NQ76 525 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-219ENST00000553488 TNFRSF19Q9NS68 423 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 EIF3KQ9UBQ5 218 aaKnown RBP6.04□□□□□ -1.44
ATXN3-219ENST00000553488 IL19Q9UHD0 177 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 PPP1R3CQ9UQK1 317 aa6.04□□□□□ -1.44
ATXN3-219ENST00000553488 PRORSD1PA6NEY8 169 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 NPIPB13A6NJU9 1138 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 TRPC5OSA6NMA1 111 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 CPSF4LA6NMK7 179 aaKnown RBP6.03□□□□□ -1.44
ATXN3-219ENST00000553488 NPIPB4C9JG80 1138 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 KPNA4O00629 521 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-219ENST00000553488 TNFRSF13BO14836 293 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-219ENST00000553488 PIN1P1O15428 100 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 GPR137BO60478 399 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 SNNO75324 88 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-219ENST00000553488 ERLIN1O75477 346 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 FSTL3O95633 263 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 CRYBA1P05813 215 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 MMP9P14780 707 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 ACADSP16219 412 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 AQP1P29972 269 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 MECP2P51608 486 aaKnown RBP6.03□□□□□ -1.44
ATXN3-219ENST00000553488 BPIFB3P59826 476 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 GNB2P62879 340 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 STX3Q13277 289 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 SCARB2Q14108 478 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 TAF11Q15544 211 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 C2orf68Q2NKX9 166 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 ZNF404Q494X3 552 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 ENTPD8Q5MY95 495 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 FAM27BQ5VT28 67 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 SLC25A47Q6Q0C1 308 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 ZNF620Q6ZNG0 422 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 ZER1Q7Z7L7 766 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 RBM45Q8IUH3 476 aaKnown RBP6.03□□□□□ -1.44
ATXN3-219ENST00000553488 ARMC8Q8IUR7 673 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 SMYD1Q8NB12 490 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 NPEPL1Q8NDH3 523 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 OR2Z1Q8NG97 314 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 ZNF420Q8TAQ5 688 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-219ENST00000553488 FAM110DQ8TAY7 271 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-219ENST00000553488 SSMEM1Q8WWF3 244 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 DYRK2Q92630 601 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 HDAC2Q92769 488 aaKnown RBP6.03□□□□□ -1.44
ATXN3-219ENST00000553488 NEIL1Q96FI4 390 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-219ENST00000553488 FAM71F1Q96KD3 344 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-219ENST00000553488 C4orf45Q96LM5 186 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 OR52B2Q96RD2 323 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 TBX15Q96SF7 602 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 PRSS27Q9BQR3 290 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 NUDT16L1Q9BRJ7 211 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms