RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 ADH4P08319 380 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 TACSTD2P09758 323 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 RAC2P15153 192 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 PAICSP22234 425 aaKnown RBP13.09□□□□□ -0.31
SHMT2-204ENST00000553324 COL8A2P25067 703 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 GRK5P34947 590 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 MPV17P39210 176 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 MMP15P51511 669 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 CHN2P52757 468 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 CCL8P80075 99 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 KRTAP1-1Q07627 177 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 PSG7Q13046 419 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 CRMP1Q14194 572 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 KRTAP21-3Q3LHN1 58 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 C1orf146Q5VVC0 180 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 OTPQ5XKR4 325 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 CORO6Q6QEF8 472 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 TMEM179BQ7Z7N9 219 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 ATG16L2Q8NAA4 619 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 HPS1Q92902 700 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 SLCO4A1Q96BD0 722 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 HAVCR1Q96D42 359 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 POM121Q96HA1 1249 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 ATF6BQ99941 703 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 NMNAT2Q9BZQ4 307 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 FN3KQ9H479 309 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 YAE1D1Q9NRH1 226 aa13.09□□□□□ -0.31
SHMT2-204ENST00000553324 MRPL22Q9NWU5 206 aaKnown RBP13.09□□□□□ -0.31
SHMT2-204ENST00000553324 NF1P21359 2839 aa13.08□□□□□ -0.31
SHMT2-204ENST00000553324 ZANQ9Y493 2812 aa13.08□□□□□ -0.31
SHMT2-204ENST00000553324 A8MV72 311 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-204ENST00000553324 INAFM1C9JVW0 142 aa13.08□□□□□ -0.32
SHMT2-204ENST00000553324 CIB2O75838 187 aa13.08□□□□□ -0.32
SHMT2-204ENST00000553324 FCGR1AP12314 374 aa13.08□□□□□ -0.32
SHMT2-204ENST00000553324 SPI1P17947 270 aa13.08□□□□□ -0.32
SHMT2-204ENST00000553324 KITLGP21583 273 aa13.08□□□□□ -0.32
SHMT2-204ENST00000553324 TNFSF4P23510 183 aa13.08□□□□□ -0.32
SHMT2-204ENST00000553324 FASP25445 335 aa13.08□□□□□ -0.32
SHMT2-204ENST00000553324 POU1F1P28069 291 aa13.08□□□□□ -0.32
SHMT2-204ENST00000553324 PYCR1P32322 319 aa13.08□□□□□ -0.32
SHMT2-204ENST00000553324 CRYBB2P43320 205 aa13.08□□□□□ -0.32
SHMT2-204ENST00000553324 MAGEB1P43366 347 aa13.08□□□□□ -0.32
SHMT2-204ENST00000553324 GPR6P46095 362 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-204ENST00000553324 TPTEP56180 551 aa13.08□□□□□ -0.32
SHMT2-204ENST00000553324 TEX30Q5JUR7 227 aa13.08□□□□□ -0.32
SHMT2-204ENST00000553324 LINC00346Q8IVM7 164 aa13.08□□□□□ -0.32
SHMT2-204ENST00000553324 SLC7A6Q92536 515 aa13.08□□□□□ -0.32
SHMT2-204ENST00000553324 SPTSSAQ969W0 71 aa13.08□□□□□ -0.32
SHMT2-204ENST00000553324 UTP4Q969X6 686 aaKnown RBP13.08□□□□□ -0.32
SHMT2-204ENST00000553324 CMBLQ96DG6 245 aa13.08□□□□□ -0.32
SHMT2-204ENST00000553324 ELMOD3Q96FG2 381 aa13.08□□□□□ -0.32
SHMT2-204ENST00000553324 SAP30LQ9HAJ7 183 aa13.08□□□□□ -0.32
SHMT2-204ENST00000553324 AP4S1Q9Y587 144 aa13.08□□□□□ -0.32
SHMT2-204ENST00000553324 IGHV4-61A0A0C4DH41 118 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 F5H5K5 113 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 LYNX1G3V0Z9 82 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 SPRY3O43610 288 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 TIPRLO75663 272 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 DBHP09172 617 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 IGHV4-31P0DP07 118 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 LYNX1P0DP58 116 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 PRKACGP22612 351 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 ENTPD1P49961 510 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 MALLQ13021 153 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 GINS1Q14691 196 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 PCK2Q16822 640 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 HFEQ30201 348 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 KRTAP27-1Q3LI81 207 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 C6orf52Q5T4I8 152 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 FBXW12Q6X9E4 464 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 CFAP77Q6ZQR2 320 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 COLCA1Q6ZS62 124 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 CCDC121Q6ZUS5 278 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 HIPK1Q86Z02 1210 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 OR51L1Q8NGJ5 315 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 OR9Q1Q8NGQ5 310 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 OR5K1Q8NHB7 308 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 DUS3LQ96G46 650 aaKnown RBP13.07□□□□□ -0.32
SHMT2-204ENST00000553324 C1QTNF5Q9BXJ0 243 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 NTN4Q9HB63 628 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 KIF17Q9P2E2 1029 aa13.07□□□□□ -0.32
SHMT2-204ENST00000553324 PURGQ9UJV8 347 aaKnown RBP13.07□□□□□ -0.32
SHMT2-204ENST00000553324 IGHV1-69-2A0A0G2JMI3 117 aa13.06□□□□□ -0.32
SHMT2-204ENST00000553324 ZNF593O00488 134 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-204ENST00000553324 SURF4O15260 269 aa13.06□□□□□ -0.32
SHMT2-204ENST00000553324 PPIHO43447 177 aaKnown RBP13.06□□□□□ -0.32
SHMT2-204ENST00000553324 LILRA1O75019 489 aa13.06□□□□□ -0.32
SHMT2-204ENST00000553324 NCR1O76036 304 aa13.06□□□□□ -0.32
SHMT2-204ENST00000553324 IGHV1-46P01743 117 aa13.06□□□□□ -0.32
SHMT2-204ENST00000553324 CD55P08174 381 aa13.06□□□□□ -0.32
SHMT2-204ENST00000553324 SELEP16581 610 aa13.06□□□□□ -0.32
SHMT2-204ENST00000553324 ERFP50548 548 aa13.06□□□□□ -0.32
SHMT2-204ENST00000553324 CDK5Q00535 292 aa13.06□□□□□ -0.32
SHMT2-204ENST00000553324 SLC3A1Q07837 685 aa13.06□□□□□ -0.32
SHMT2-204ENST00000553324 CDK5R2Q13319 367 aa13.06□□□□□ -0.32
SHMT2-204ENST00000553324 ATP6AP1Q15904 470 aa13.06□□□□□ -0.32
SHMT2-204ENST00000553324 TSTQ16762 297 aaKnown RBP13.06□□□□□ -0.32
SHMT2-204ENST00000553324 RSPO1Q2MKA7 263 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-204ENST00000553324 ACSM5Q6NUN0 579 aa13.06□□□□□ -0.32
SHMT2-204ENST00000553324 ZDHHC13Q8IUH4 622 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms