RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 ZNF861PO60384 105 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 FABP3P05413 133 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 EIF4EP06730 217 aaKnown RBP3.4□□□□□ -1.87
SCFD1-209ENST00000553280 RHOXF2BP0C7M4 288 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 HOXB8P17481 243 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-209ENST00000553280 USF1P22415 310 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-209ENST00000553280 ZNF136P52737 540 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 ATP6V0D1P61421 351 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 TSC22D1Q15714 1073 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 FHOD3Q2V2M9 1422 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 ZNF829Q3KNS6 432 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-209ENST00000553280 FBXO48Q5FWF7 155 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 PIGGQ5H8A4 983 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 ASCL4Q6XD76 172 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 SLC35D2Q76EJ3 337 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 ABHD12BQ7Z5M8 362 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-209ENST00000553280 FAM71AQ8IYT1 594 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 KIF2BQ8N4N8 673 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 CBR4Q8N4T8 237 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 ASCC1Q8N9N2 400 aaKnown RBP3.4□□□□□ -1.87
SCFD1-209ENST00000553280 Q8N9W7 124 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 NOXO1Q8NFA2 376 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 OR4A15Q8NGL6 344 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 OR10G4Q8NGN3 311 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 OR8K3Q8NH51 312 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 OR51E1Q8TCB6 317 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 TCP10LQ8TDR4 215 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 TMEM158Q8WZ71 300 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 RHOXF2Q9BQY4 288 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 HDHD3Q9BSH5 251 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-209ENST00000553280 SLC25A2Q9BXI2 301 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 PARP12Q9H0J9 701 aaKnown RBP3.4□□□□□ -1.87
SCFD1-209ENST00000553280 UBE2ZQ9H832 354 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-209ENST00000553280 FAM49BQ9NUQ9 324 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 FLVCR2Q9UPI3 526 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 KPTNQ9Y664 436 aa3.4□□□□□ -1.87
SCFD1-209ENST00000553280 CAMTA1Q9Y6Y1 1673 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 AGRNO00468 2067 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 IGLV11-55A0A075B6I3 123 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 IGHV3-64DA0A0J9YX35 117 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 CENPXA8MT69 81 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 FAM166BA8MTA8 275 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 KLLNB2CW77 178 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 TRIM49D1C9J1S8 452 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 PANO1I0J062 215 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 MPDU1O75352 247 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 PCCAP05165 728 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-209ENST00000553280 CASQ1P31415 396 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 FABP6P51161 128 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 CLDN6P56747 220 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 XIAPP98170 497 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 ART3Q13508 389 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 MPPED2Q15777 294 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 HES5Q5TA89 166 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 ARL9Q6T311 187 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 FBXW12Q6X9E4 464 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 OR2W3Q7Z3T1 314 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 UNC93AQ86WB7 457 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 SPAG16Q8N0X2 631 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 SNX31Q8N9S9 440 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 GATSQ8NAP1 163 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 OR10AD1Q8NGE0 317 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 OR51G1Q8NGK1 321 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 OR13C9Q8NGT0 318 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 MRGPRFQ96AM1 343 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 ZNF317Q96PQ6 595 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-209ENST00000553280 AGMATQ9BSE5 352 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 KIR3DX1Q9H7L2 352 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 ISYNA1Q9NPH2 558 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 SLC39A1Q9NY26 324 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 UVRAGQ9P2Y5 699 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 RPS6KB2Q9UBS0 482 aa3.39□□□□□ -1.87
SCFD1-209ENST00000553280 ZMAT5Q9UDW3 170 aaKnown RBP3.39□□□□□ -1.87
SCFD1-209ENST00000553280 A0A1W2PRF3 423 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 A0A1W2PRM7 423 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 H3BN98 237 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 CD5LO43866 347 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 SLC19A2O60779 497 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 ETHE1O95571 254 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 KLK1P06870 262 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 ERGP11308 486 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 GFAPP14136 432 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 RAB5AP20339 215 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 IL32P24001 234 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 RPS10P46783 165 aaKnown RBP3.38□□□□□ -1.87
SCFD1-209ENST00000553280 HADHBP55084 474 aaKnown RBP3.38□□□□□ -1.87
SCFD1-209ENST00000553280 PRR3P79522 188 aaKnown RBP3.38□□□□□ -1.87
SCFD1-209ENST00000553280 SLC39A6Q13433 755 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 TFDP2Q14188 446 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 RCAN2Q14206 197 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 CAPRIN1Q14444 709 aaKnown RBP3.38□□□□□ -1.87
SCFD1-209ENST00000553280 STK11Q15831 433 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 GCSAMLQ5JQS6 135 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 RWDD4Q6NW29 188 aaKnown RBP3.38□□□□□ -1.87
SCFD1-209ENST00000553280 PRMT9Q6P2P2 845 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 DNAJC24Q6P3W2 148 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 C11orf53Q8IXP5 236 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 ARHGAP18Q8N392 663 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 MDS2Q8NDY4 140 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 OR5AR1Q8NGP9 310 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms