RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 CD5P06127 495 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 HOXC4P09017 264 aaPredicted RBP5.21□□□□□ -1.58
VPS29-210ENST00000552130 WNT2P09544 360 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 CT45A6P0DMU7 189 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 CT45A5P0DMU8 189 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 CT45A7P0DMV0 189 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 SLC2A2P11168 524 aaPredicted RBP5.21□□□□□ -1.58
VPS29-210ENST00000552130 PVRP15151 417 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 SLC2A5P22732 501 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 RPS12P25398 132 aaKnown RBP5.21□□□□□ -1.58
VPS29-210ENST00000552130 GPR183P32249 361 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 SOX3P41225 446 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 KIR2DS4P43632 304 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 ATP4BP51164 291 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 TAS2R39P59534 338 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 ERVPABLB-1P60509 514 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 RPS27AP62979 156 aaKnown RBP5.21□□□□□ -1.58
VPS29-210ENST00000552130 RPL19P84098 196 aaKnown RBP5.21□□□□□ -1.58
VPS29-210ENST00000552130 CD164Q04900 197 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 ECH1Q13011 328 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 TFDP2Q14188 446 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 PRPSAP1Q14558 356 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 SMCO1Q147U7 214 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 CT45A1Q5HYN5 189 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 SUMO4Q6EEV6 95 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 KRTAP5-11Q6L8G4 156 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 RWDD4Q6NW29 188 aaKnown RBP5.21□□□□□ -1.58
VPS29-210ENST00000552130 ZNF544Q6NX49 715 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 APOOLQ6UXV4 268 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 LGI3Q8N145 548 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 C12orf29Q8N999 325 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 Q8N9P0 234 aaPredicted RBP5.21□□□□□ -1.58
VPS29-210ENST00000552130 OR10J5Q8NHC4 309 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 CT45A3Q8NHU0 189 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 CRYGNQ8WXF5 182 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 EEF1AKMT3Q96AZ1 226 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 CMTM7Q96FZ5 175 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 URB1-AS1Q96HZ7 61 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 TMEM56Q96MV1 263 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 MRPL45Q9BRJ2 306 aaKnown RBP5.21□□□□□ -1.58
VPS29-210ENST00000552130 TRIM4Q9C037 500 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 PCBD2Q9H0N5 130 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 TLNRD1Q9H1K6 362 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 OR51B5Q9H339 312 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 PLAC1Q9HBJ0 212 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 PARVAQ9NVD7 372 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 CMTM6Q9NX76 183 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 ELOVL5Q9NYP7 299 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 PAK5Q9P286 719 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 RNF7Q9UBF6 113 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 BTNL2Q9UIR0 455 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 EVPLQ92817 2033 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 COL22A1Q8NFW1 1626 aaPredicted RBP5.2□□□□□ -1.58
VPS29-210ENST00000552130 TINCRA0A1B0GVN0 87 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 MGST3O14880 152 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 BUB3O43684 328 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 TYROBPO43914 113 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 FKBP6O75344 327 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 ENTPD6O75354 484 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 PROP1O75360 226 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 DCTN3O75935 186 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 TBX6O95947 436 aaPredicted RBP5.2□□□□□ -1.58
VPS29-210ENST00000552130 CRYAAP02489 173 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 GUSBP08236 651 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 HIST1H1EP10412 219 aaKnown RBP5.2□□□□□ -1.58
VPS29-210ENST00000552130 ZNF250P15622 560 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 BCL3P20749 454 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 F8A1P23610 371 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 HTR1DP28221 377 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 ERFP50548 548 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 HNRNPA3P51991 378 aaKnown RBP5.2□□□□□ -1.58
VPS29-210ENST00000552130 LIM2P55344 173 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 TGFBR3Q03167 851 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 FCHO2Q0JRZ9 810 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 TRIP6Q15654 476 aaKnown RBP5.2□□□□□ -1.58
VPS29-210ENST00000552130 ZIC1Q15915 447 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 ZNF260Q3ZCT1 412 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 CCDC58Q4VC31 144 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 VAX1Q5SQQ9 334 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 HBMQ6B0K9 141 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 GDPD3Q7L5L3 318 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 ZNF843Q8N446 348 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 ATPAF2Q8N5M1 289 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 SMRP1Q8NCR6 262 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 OR51D1Q8NGF3 324 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 SPATA3Q8NHX4 192 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 SCMH1Q96GD3 660 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 MS4A14Q96JA4 679 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 RHNO1Q9BSD3 238 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 IMPAD1Q9NX62 359 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 EHFQ9NZC4 300 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 CIDEBQ9UHD4 219 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 SMPXQ9UHP9 88 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 ENOPH1Q9UHY7 261 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 RALYQ9UKM9 306 aaKnown RBP5.2□□□□□ -1.58
VPS29-210ENST00000552130 KLF12Q9Y4X4 402 aa5.2□□□□□ -1.58
VPS29-210ENST00000552130 IGLV3-22A0A075B6J6 115 aa5.19□□□□□ -1.58
VPS29-210ENST00000552130 TMEM272A0A1B0GTI8 110 aa5.19□□□□□ -1.58
VPS29-210ENST00000552130 LINC01553A4QN01 128 aa5.19□□□□□ -1.58
VPS29-210ENST00000552130 ZNF729A6NN14 1252 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms