RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 OTCP00480 354 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 PTHP01270 115 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 FRMD6-AS1P0C7T7 363 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 FAM90A15PP0C7V4 464 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 FAM90A14PP0C7W9 464 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 RPS2P15880 293 aaKnown RBP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 ZNF26P17031 533 aaPredicted RBP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 KITLGP21583 273 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 NTSP30990 170 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 RYKP34925 604 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 SAA4P35542 130 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 PGM1P36871 562 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 CCT3P49368 545 aaKnown RBP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 RGS6P49758 472 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 DYNLT3P51808 116 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 NCBP2P52298 156 aaKnown RBP eCLIP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 ERVS71-1P61550 626 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 TNFAIP6P98066 277 aaPredicted RBP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 ACSM2AQ08AH3 577 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 RBBP4Q09028 425 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 DLG1Q12959 904 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 IFT88Q13099 833 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 CAMK2DQ13557 499 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 GTF2H2Q13888 395 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 PDE7AQ13946 482 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 KRT72Q14CN4 511 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 NDUFAF6Q330K2 333 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 ARHGAP11BQ3KRB8 267 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 CDONQ4KMG0 1287 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 ALG10Q5BKT4 473 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 ALG10BQ5I7T1 473 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 DCST2Q5T1A1 773 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 RNASEH2BQ5TBB1 312 aaKnown RBP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 GKAP1Q5VSY0 366 aaPredicted RBP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 METTL11BQ5VVY1 283 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 GTF2H2CQ6P1K8 395 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 SLC27A4Q6P1M0 643 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 C8orf82Q6P1X6 216 aaPredicted RBP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 EMBQ6PCB8 327 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 UNQ9370/PRO34162Q6UXP9 181 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 LINC00336Q6ZUF6 198 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 EIF3MQ7L2H7 374 aaKnown RBP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 PEX26Q7Z412 305 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 GOLGA7Q7Z5G4 137 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 ZER1Q7Z7L7 766 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 EGFL6Q8IUX8 553 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 LRRC8AQ8IWT6 810 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 SYCE1Q8N0S2 351 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 CENPLQ8N0S6 344 aaPredicted RBP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 LYG1Q8N1E2 194 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 GPR137CQ8N3F9 429 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 TMEM99Q8N816 258 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 COX18Q8N8Q8 333 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 LY6G5BQ8NDX9 201 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 ADPRHL1Q8NDY3 354 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 SLC30A7Q8NEW0 376 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 ATP6V1C2Q8NEY4 427 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 OR8B3Q8NGG8 313 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 C8orf46Q8TAG6 207 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 KLF14Q8TD94 323 aaPredicted RBP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 MGARPQ8TDB4 240 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 C16orf78Q8WTQ4 265 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 GRK7Q8WTQ7 553 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 DCAKDQ8WVC6 231 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 TSEN15Q8WW01 171 aaKnown RBP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 C1orf54Q8WWF1 131 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 GEMIN6Q8WXD5 167 aaKnown RBP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 EXOSC8Q96B26 276 aaKnown RBP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 DDIT4LQ96D03 193 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 SLC41A3Q96GZ6 507 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 MAGEB18Q96M61 343 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 OR8B2Q96RD0 313 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 ZNF382Q96SR6 550 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 PCGF1Q9BSM1 259 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 THUMPD3Q9BV44 507 aaKnown RBP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 ACPTQ9BZG2 426 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 ZNF350Q9GZX5 532 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 IQCGQ9H095 443 aaKnown RBP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 NMRAL1Q9HBL8 299 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 POLE3Q9NRF9 147 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 FARSBQ9NSD9 589 aaKnown RBP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 ZKSCAN7Q9P0L1 754 aaPredicted RBP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 KAAG1Q9UBP8 84 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 OSGIN1Q9UJX0 560 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 ZNF225Q9UK10 706 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 PCTPQ9UKL6 214 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 FZR1Q9UM11 496 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 PPP1R3CQ9UQK1 317 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 SLC35A3Q9Y2D2 325 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 ZNF256Q9Y2P7 627 aaPredicted RBP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 FAM96BQ9Y3D0 163 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 ADAM18Q9Y3Q7 739 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 TEX264Q9Y6I9 313 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 FRAS1Q86XX4 4008 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 DNAH9Q9NYC9 4486 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 DOCK11Q5JSL3 2073 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 HEATR1Q9H583 2144 aaKnown RBP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 A0A096LPI6 279 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 TMED7-TICAM2A0A0A6YYA0 188 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 IGLV1-36A0A0B4J1U3 117 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms