RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 SPAM1P38567 509 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 CRYBB2P43320 205 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 KIR2DS2P43631 304 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 CCNHP51946 323 aaPredicted RBP4.05□□□□□ -1.76
CPSF6-206ENST00000550987 CXCL6P80162 114 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 GNA13Q14344 377 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 GK3PQ14409 553 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 STK38Q15208 465 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 TGFBIQ15582 683 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 USF2Q15853 346 aaPredicted RBP4.05□□□□□ -1.76
CPSF6-206ENST00000550987 EIPR1Q53HC9 387 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 PAN3Q58A45 887 aaKnown RBP4.05□□□□□ -1.76
CPSF6-206ENST00000550987 XKR7Q5GH72 579 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 PTRHD1Q6GMV3 140 aaKnown RBP4.05□□□□□ -1.76
CPSF6-206ENST00000550987 TWF2Q6IBS0 349 aaKnown RBP4.05□□□□□ -1.76
CPSF6-206ENST00000550987 OR52E8Q6IFG1 317 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 FRA10AC1Q70Z53 315 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 GDPD3Q7L5L3 318 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 ERI1Q8IV48 349 aaKnown RBP4.05□□□□□ -1.76
CPSF6-206ENST00000550987 GPR137CQ8N3F9 429 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 CATSPER1Q8NEC5 780 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 OR2L3Q8NG85 312 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 NRGNQ92686 78 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 CIDECQ96AQ7 238 aaPredicted RBP4.05□□□□□ -1.76
CPSF6-206ENST00000550987 MCUR1Q96AQ8 359 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 PLEKHA8Q96JA3 519 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 PANX2Q96RD6 677 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 CHP1Q99653 195 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 TSG101Q99816 390 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 TMEM175Q9BSA9 504 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 UCK1Q9HA47 277 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 MARCH5Q9NX47 278 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 PAK5Q9P286 719 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 PEF1Q9UBV8 284 aaKnown RBP4.05□□□□□ -1.76
CPSF6-206ENST00000550987 UBQLN1Q9UMX0 589 aaKnown RBP4.05□□□□□ -1.76
CPSF6-206ENST00000550987 TP53TG5Q9Y2B4 290 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 PEX16Q9Y5Y5 336 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 AKAP6Q13023 2319 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 CMYA5Q8N3K9 4069 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 A0A087WWV3 80 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 C9JVG2 144 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 WWP2O00308 870 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 PSTPIP1O43586 416 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 ERLIN2O94905 339 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 CST1P01037 141 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 SERPIND1P05546 499 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 RPSAP08865 295 aaKnown RBP4.04□□□□□ -1.76
CPSF6-206ENST00000550987 RBMY1CP0DJD4 496 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 FOLR2P14207 255 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 ABOP16442 354 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 SLC2A5P22732 501 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 MT3P25713 68 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 RRM2P31350 389 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 HNRNPH3P31942 346 aaKnown RBP4.04□□□□□ -1.76
CPSF6-206ENST00000550987 BIDP55957 195 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 C21orf59P57076 290 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 RGS8P57771 180 aaPredicted RBP4.04□□□□□ -1.76
CPSF6-206ENST00000550987 SCRN3Q0VDG4 424 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 ART3Q13508 389 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 OR5I1Q13606 314 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 MAPRE2Q15555 327 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 SNCBQ16143 134 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 LRRC36Q1X8D7 754 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 PRR30Q53SZ7 412 aaPredicted RBP4.04□□□□□ -1.76
CPSF6-206ENST00000550987 SPANXN2Q5MJ10 180 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 PPM1LQ5SGD2 360 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 DEGS2Q6QHC5 323 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 TPGS1Q6ZTW0 290 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 BZW1Q7L1Q6 419 aaKnown RBP4.04□□□□□ -1.76
CPSF6-206ENST00000550987 LUZP2Q86TE4 346 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 GPR65Q8IYL9 337 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 FTMTQ8N4E7 242 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 ZNF565Q8N9K5 539 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 OR4K14Q8NGD5 310 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 CCDC12Q8WUD4 166 aaPredicted RBP4.04□□□□□ -1.76
CPSF6-206ENST00000550987 OR1E3Q8WZA6 343 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 FGGYQ96C11 551 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 HAVCR1Q96D42 359 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 ZMYND19Q96E35 227 aaPredicted RBP4.04□□□□□ -1.76
CPSF6-206ENST00000550987 PGLYRP4Q96LB8 373 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 MBOAT7Q96N66 472 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 TBX15Q96SF7 602 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 CYTH2Q99418 400 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 KCNS3Q9BQ31 491 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 C11orf70Q9BRQ4 267 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 LLPHQ9BRT6 129 aaKnown RBP4.04□□□□□ -1.76
CPSF6-206ENST00000550987 SRXN1Q9BYN0 137 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 CENPHQ9H3R5 247 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 LY9Q9HBG7 655 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 TMEM165Q9HC07 324 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 KCNIP3Q9Y2W7 256 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 KNL1Q8NG31 2342 aa4.04□□□□□ -1.76
CPSF6-206ENST00000550987 OBSL1O75147 1896 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 CSMD3Q7Z407 3707 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 HECTD4Q9Y4D8 3996 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 A0A0J9YYE9 177 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 A0A1W2PNU3 283 aaPredicted RBP4.03□□□□□ -1.76
CPSF6-206ENST00000550987 PSMD11O00231 422 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 DCTN6O00399 190 aa4.03□□□□□ -1.76
CPSF6-206ENST00000550987 CDH16O75309 829 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms