RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 AQP6Q13520 282 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 SPRNQ5BIV9 151 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 KLF17Q5JT82 389 aaPredicted RBP6.41□□□□□ -1.38
NEK3-201ENST00000550331 TMPRSS11FQ6ZWK6 438 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 MBOAT2Q6ZWT7 520 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 ARPINQ7Z6K5 226 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 MICU2Q8IYU8 434 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 MUC20Q8N307 709 aaPredicted RBP6.41□□□□□ -1.38
NEK3-201ENST00000550331 SIGLECL1Q8N7X8 197 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 OR2Z1Q8NG97 314 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 OR13C2Q8NGS9 318 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 ACOT11Q8WXI4 607 aaPredicted RBP6.41□□□□□ -1.38
NEK3-201ENST00000550331 HAVCR1Q96D42 359 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 DCLRE1CQ96SD1 692 aaKnown RBP6.41□□□□□ -1.38
NEK3-201ENST00000550331 MRI1Q9BV20 369 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 FNDC11Q9BVV2 318 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 ANKRD19PQ9H560 264 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 VIPAS39Q9H9C1 493 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 EMC7Q9NPA0 242 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 SAR1AQ9NR31 198 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 MMP26Q9NRE1 261 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 DCAF16Q9NXF7 216 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 GRHPRQ9UBQ7 328 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 EGFL7Q9UHF1 273 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 ATPIF1Q9UII2 106 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 PPP1R3CQ9UQK1 317 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 LRCH1Q9Y2L9 728 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 PPIAL4AQ9Y536 164 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 INSIG2Q9Y5U4 225 aa6.41□□□□□ -1.38
NEK3-201ENST00000550331 A0A087WUU8 490 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 PRSS37A4D1T9 235 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 OR6C6A6NF89 314 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 DNAJC9-AS1A6NH13 148 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 TRAPPC2LH3BP13 241 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 TMEM178BH3BS89 294 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 H7C1C5 153 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 CLDN34H7C241 214 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 FFAR1O14842 300 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 SLC22A2O15244 555 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 SGCEO43556 437 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 FSTL3O95633 263 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 SCG5P05408 212 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 RNASE1P07998 156 aaKnown RBP6.4□□□□□ -1.38
NEK3-201ENST00000550331 CD14P08571 375 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 PPIAL4GP0DN37 164 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 RAC2P15153 192 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 FUT4P22083 530 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 RPL4P36578 427 aaKnown RBP6.4□□□□□ -1.38
NEK3-201ENST00000550331 RGS6P49758 472 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 SEC61A1P61619 476 aaKnown RBP6.4□□□□□ -1.38
NEK3-201ENST00000550331 LSM6P62312 80 aaKnown RBP6.4□□□□□ -1.38
NEK3-201ENST00000550331 LCN6P62502 163 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 GUCY1A3Q02108 690 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 ZMYND11Q15326 602 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 ZBED5Q49AG3 693 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 IFI44LQ53G44 452 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 ESCO2Q56NI9 601 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 MESTQ5EB52 335 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 SLC27A4Q6P1M0 643 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 ZNF730Q6ZMV8 503 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 Q6ZR03 302 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 FAM122BQ7Z309 247 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 HDXQ7Z353 690 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 VTCN1Q7Z7D3 282 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 ITLN1Q8WWA0 313 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 CMBLQ96DG6 245 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 Q96M85 177 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 C1orf147Q96MC9 270 aaPredicted RBP6.4□□□□□ -1.38
NEK3-201ENST00000550331 ZNF570Q96NI8 536 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 OR2V2Q96R30 315 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 GPX7Q96SL4 187 aaPredicted RBP6.4□□□□□ -1.38
NEK3-201ENST00000550331 POFUT1Q9H488 388 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 NMNAT1Q9HAN9 279 aaPredicted RBP6.4□□□□□ -1.38
NEK3-201ENST00000550331 GCM1Q9NP62 436 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 RHCGQ9UBD6 479 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 ASH2LQ9UBL3 628 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 ZNF69Q9UC07 566 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 OR5V1Q9UGF6 321 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 IL20RAQ9UHF4 553 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 TMEM5Q9Y2B1 443 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 ADAM18Q9Y3Q7 739 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 SNX13Q9Y5W8 968 aa6.4□□□□□ -1.38
NEK3-201ENST00000550331 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.4□□□□□ -1.38
NEK3-201ENST00000550331 LOC100653049A0A140TA62 436 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 CEACAM18A8MTB9 384 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 J3KTA2 159 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 CDC42EP2O14613 210 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 KHDRBS3O75525 346 aaKnown RBP6.39□□□□□ -1.39
NEK3-201ENST00000550331 KRT34O76011 436 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 CTLA4P16410 223 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 ZNF26P17031 533 aaPredicted RBP6.39□□□□□ -1.39
NEK3-201ENST00000550331 SDHAP31040 664 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 GPR4P46093 362 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 YAP1P46937 504 aaKnown RBP6.39□□□□□ -1.39
NEK3-201ENST00000550331 MTNR1AP48039 350 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 SRP9P49458 86 aaKnown RBP6.39□□□□□ -1.39
NEK3-201ENST00000550331 ERFP50548 548 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 IL13RA1P78552 427 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 PAX8Q06710 450 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 BAMBIQ13145 260 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms