RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 DCAF12L2Q5VW00 463 aa11.32□□□□□ -0.6
GCN1-206ENST00000549815 C1orf94Q6P1W5 598 aa11.32□□□□□ -0.6
GCN1-206ENST00000549815 PGM2L1Q6PCE3 622 aa11.32□□□□□ -0.6
GCN1-206ENST00000549815 FBXW12Q6X9E4 464 aa11.32□□□□□ -0.6
GCN1-206ENST00000549815 COLCA1Q6ZS62 124 aa11.32□□□□□ -0.6
GCN1-206ENST00000549815 ZBTB46Q86UZ6 589 aa11.32□□□□□ -0.6
GCN1-206ENST00000549815 PGAM4Q8N0Y7 254 aa11.32□□□□□ -0.6
GCN1-206ENST00000549815 TEX29Q8N6K0 151 aa11.32□□□□□ -0.6
GCN1-206ENST00000549815 OR2Z1Q8NG97 314 aa11.32□□□□□ -0.6
GCN1-206ENST00000549815 FANK1Q8TC84 345 aa11.32□□□□□ -0.6
GCN1-206ENST00000549815 ITLN1Q8WWA0 313 aa11.32□□□□□ -0.6
GCN1-206ENST00000549815 ERMAPQ96PL5 475 aaPredicted RBP11.32□□□□□ -0.6
GCN1-206ENST00000549815 COQ7Q99807 217 aa11.32□□□□□ -0.6
GCN1-206ENST00000549815 UBAP1Q9NZ09 502 aa11.32□□□□□ -0.6
GCN1-206ENST00000549815 POLR3KQ9Y2Y1 108 aaPredicted RBP11.32□□□□□ -0.6
GCN1-206ENST00000549815 F5H0A9 414 aaPredicted RBP11.31□□□□□ -0.6
GCN1-206ENST00000549815 GMNNO75496 209 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 HIST1H1CP16403 213 aaKnown RBP11.31□□□□□ -0.6
GCN1-206ENST00000549815 TNFRSF1AP19438 455 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 TNFSF4P23510 183 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 SLC6A6P31641 620 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 MSX2P35548 267 aaPredicted RBP11.31□□□□□ -0.6
GCN1-206ENST00000549815 RGS6P49758 472 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 SMIM11AP58511 58 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 LCN2P80188 198 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 SPIBQ01892 262 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 HLXQ14774 488 aaPredicted RBP11.31□□□□□ -0.6
GCN1-206ENST00000549815 ZMYND11Q15326 602 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 TUSC1Q2TAM9 212 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 LEG1Q6P5S2 330 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 DNM1P34Q6PK57 102 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 CORO6Q6QEF8 472 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 ZNF771Q7L3S4 317 aaPredicted RBP11.31□□□□□ -0.6
GCN1-206ENST00000549815 PEG10Q86TG7 708 aaKnown RBP11.31□□□□□ -0.6
GCN1-206ENST00000549815 LRRC28Q86X40 367 aaPredicted RBP11.31□□□□□ -0.6
GCN1-206ENST00000549815 GJC3Q8NFK1 279 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 SLC26A10Q8NG04 563 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 ZNF418Q8TF45 676 aaPredicted RBP11.31□□□□□ -0.6
GCN1-206ENST00000549815 NSMCE2Q96MF7 247 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 OR2V2Q96R30 315 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 NMNAT3Q96T66 252 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 FAM107BQ9H098 131 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 HDHD2Q9H0R4 259 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 C7orf69Q9H7B7 122 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 PATZ1Q9HBE1 687 aaKnown RBP11.31□□□□□ -0.6
GCN1-206ENST00000549815 SRA1Q9HD15 236 aaKnown RBP11.31□□□□□ -0.6
GCN1-206ENST00000549815 MMP26Q9NRE1 261 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 PTTG3PQ9NZH4 202 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 PCDHB10Q9UN67 800 aa11.31□□□□□ -0.6
GCN1-206ENST00000549815 A0A1B0GWJ7 208 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 A8MXK9 166 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 TRAPPC2LH3BP13 241 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 ARPC2O15144 300 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 FOXH1O75593 365 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 RGS9O75916 674 aaPredicted RBP11.3□□□□□ -0.6
GCN1-206ENST00000549815 FABP3P05413 133 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 SBK2P0C263 348 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 RRM2P31350 389 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 SLC6A9P48067 706 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 MMP16P51512 607 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 SEC61A1P61619 476 aaKnown RBP11.3□□□□□ -0.6
GCN1-206ENST00000549815 BTG1P62324 171 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 SAMD4BQ5PRF9 694 aaKnown RBP11.3□□□□□ -0.6
GCN1-206ENST00000549815 OR2T2Q6IF00 324 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 SLC18B1Q6NT16 456 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 CFAP77Q6ZQR2 320 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 OR5AS1Q8N127 324 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 DEFB108BQ8NET1 73 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 OR8G5Q8NG78 346 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 OR4K13Q8NH42 304 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 NANPQ8TBE9 248 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 ST7LQ8TDW4 575 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 APOBEC3DQ96AK3 386 aaPredicted RBP11.3□□□□□ -0.6
GCN1-206ENST00000549815 CDRT15Q96T59 188 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 DDOQ99489 341 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 C1QTNF5Q9BXJ0 243 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 NSRP1Q9H0G5 558 aaKnown RBP11.3□□□□□ -0.6
GCN1-206ENST00000549815 GCM1Q9NP62 436 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 IL1RAPQ9NPH3 570 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 PNRC2Q9NPJ4 139 aaKnown RBP11.3□□□□□ -0.6
GCN1-206ENST00000549815 ARL8BQ9NVJ2 186 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 TAGLN3Q9UI15 199 aa11.3□□□□□ -0.6
GCN1-206ENST00000549815 OR6C68A6NDL8 312 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 IQCF6A8MYZ5 107 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 H0YL77 283 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 TMEM178BH3BS89 294 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 HAX1O00165 279 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 SURF4O15260 269 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 MLNRO43193 412 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 OR10H3O60404 316 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 RENP00797 406 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 GGT2P36268 569 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 CENPAP49450 140 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 COMPP49747 757 aaPredicted RBP11.29□□□□□ -0.6
GCN1-206ENST00000549815 HMGA2P52926 109 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 TSPAN31Q12999 210 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 PGBD2Q6P3X8 592 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 ZNF620Q6ZNG0 422 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 PIGWQ7Z7B1 504 aa11.29□□□□□ -0.6
GCN1-206ENST00000549815 CPLX4Q7Z7G2 160 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms