RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 PRG3Q9Y2Y8 225 aaPredicted RBP3.35□□□□□ -1.87
USP15-213ENST00000549268 GOLT1BQ9Y3E0 138 aa3.35□□□□□ -1.87
USP15-213ENST00000549268 RLFQ13129 1914 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 LTBP1Q14766 1721 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 ZNF816-ZNF321PA0A0X1KG74 233 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 TSPAN11A1L157 253 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 C12orf77C9JDV5 145 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 F6UB75 175 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 PLPP1O14494 284 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 NDUFS6O75380 124 aaKnown RBP3.34□□□□□ -1.87
USP15-213ENST00000549268 VAPBO95292 243 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 HBE1P02100 147 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 KLK1P06870 262 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 FOLR1P15328 257 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 RFC3P40938 356 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 KCNJ3P48549 501 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 CCR8P51685 355 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 STXBP1P61764 594 aaKnown RBP3.34□□□□□ -1.87
USP15-213ENST00000549268 SLC25A11Q02978 314 aaKnown RBP3.34□□□□□ -1.87
USP15-213ENST00000549268 STX3Q13277 289 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 EIF4EBP2Q13542 120 aaPredicted RBP3.34□□□□□ -1.87
USP15-213ENST00000549268 KIAA0087Q14695 138 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 LCN12Q6JVE5 192 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 PRMT9Q6P2P2 845 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 Q6P435 159 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 ZNF621Q6ZSS3 439 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 COX15Q7KZN9 410 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 SELENOHQ8IZQ5 122 aaKnown RBP3.34□□□□□ -1.87
USP15-213ENST00000549268 KIF2BQ8N4N8 673 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 OR1N2Q8NGR9 330 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 OR51F2Q8NH61 342 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 MCOLN3Q8TDD5 553 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 BAALCQ8WXS3 180 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 MRGPRFQ96AM1 343 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 RNF185Q96GF1 192 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 CPB2Q96IY4 423 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 RNF170Q96K19 258 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 FAM210BQ96KR6 192 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 LZTS2Q9BRK4 669 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 RIOK2Q9BVS4 552 aaKnown RBP3.34□□□□□ -1.87
USP15-213ENST00000549268 FRMD8P1Q9BZ68 369 aaPredicted RBP3.34□□□□□ -1.87
USP15-213ENST00000549268 SRMSQ9H3Y6 488 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 TMEM38AQ9H6F2 299 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 PATZ1Q9HBE1 687 aaKnown RBP3.34□□□□□ -1.87
USP15-213ENST00000549268 CD209Q9NNX6 404 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 CCL28Q9NRJ3 127 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 STX18Q9P2W9 335 aaKnown RBP3.34□□□□□ -1.87
USP15-213ENST00000549268 TRAPPC4Q9Y296 219 aa3.34□□□□□ -1.87
USP15-213ENST00000549268 PHF3Q92576 2039 aaKnown RBP3.33□□□□□ -1.88
USP15-213ENST00000549268 KRTAP4-16G5E9R7 235 aaPredicted RBP3.33□□□□□ -1.88
USP15-213ENST00000549268 XRCC2O43543 280 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 SMC2O95347 1197 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 LSM8O95777 96 aaKnown RBP3.33□□□□□ -1.88
USP15-213ENST00000549268 PRPS2P11908 318 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 NQO2P16083 231 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 ZNF32P17041 273 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 IVDP26440 423 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 IL12BP29460 328 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 GPR6P46095 362 aaPredicted RBP3.33□□□□□ -1.88
USP15-213ENST00000549268 NMUP48645 174 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 CSNK1A1P48729 337 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 UGT2B15P54855 530 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 HERVK_113P61574 105 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 SP4Q02446 784 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 ZNF92Q03936 586 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 COTL1Q14019 142 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 PSG5Q15238 335 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 PSMD5Q16401 504 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 PSG3Q16557 428 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 TPRG1LQ5T0D9 272 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 CLEC6AQ6EIG7 209 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 ADNP2Q6IQ32 1131 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 OR2W3Q7Z3T1 314 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 SYS1Q8N2H4 156 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 DUSP18Q8NEJ0 188 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 OR4F15Q8NGB8 312 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 OR10G9Q8NGN4 311 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 SDR42E1Q8WUS8 393 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 SRSF12Q8WXF0 261 aaKnown RBP3.33□□□□□ -1.88
USP15-213ENST00000549268 TMEM54Q969K7 222 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 FAM104AQ969W3 186 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 EEF1AKMT3Q96AZ1 226 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 ZNF317Q96PQ6 595 aaPredicted RBP3.33□□□□□ -1.88
USP15-213ENST00000549268 NAPGQ99747 312 aaPredicted RBP3.33□□□□□ -1.88
USP15-213ENST00000549268 GOLPH3Q9H4A6 298 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 ANKHQ9HCJ1 492 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 CTPS2Q9NRF8 586 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 EXD2Q9NVH0 621 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 CLN6Q9NWW5 311 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 UBAP1Q9NZ09 502 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 CLCF1Q9UBD9 225 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 PCYOX1Q9UHG3 505 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 ENPP5Q9UJA9 477 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 MAP3K15Q6ZN16 1313 aa3.33□□□□□ -1.88
USP15-213ENST00000549268 IGKV1D-13A0A0B4J2D9 117 aa3.32□□□□□ -1.88
USP15-213ENST00000549268 A0A1W2PRF3 423 aa3.32□□□□□ -1.88
USP15-213ENST00000549268 A0A1W2PRM7 423 aa3.32□□□□□ -1.88
USP15-213ENST00000549268 ZNF726A6NNF4 738 aa3.32□□□□□ -1.88
USP15-213ENST00000549268 LYRM9A8MSI8 78 aa3.32□□□□□ -1.88
USP15-213ENST00000549268 SMKR1H3BMG3 65 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms