RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 TNFRSF1BP20333 461 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 KITLGP21583 273 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 OR1E2P47887 323 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 SRP9P49458 86 aaKnown RBP7.11□□□□□ -1.27
TROAP-208ENST00000548817 GNB2P62879 340 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 COL10A1Q03692 680 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 ZMYND11Q15326 602 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 LRRC23Q53EV4 343 aaPredicted RBP7.11□□□□□ -1.27
TROAP-208ENST00000548817 KLF17Q5JT82 389 aaPredicted RBP7.11□□□□□ -1.27
TROAP-208ENST00000548817 NANOGP8Q6NSW7 305 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 NLRC3Q7RTR2 1065 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 OAFQ86UD1 273 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 IGFN1Q86VF2 1251 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 C1orf87Q8N0U7 546 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 BCL6BQ8N143 479 aaPredicted RBP7.11□□□□□ -1.27
TROAP-208ENST00000548817 OR13G1Q8NGZ3 307 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 OR51A7Q8NH64 312 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 FAM110DQ8TAY7 271 aaPredicted RBP7.11□□□□□ -1.27
TROAP-208ENST00000548817 ITLN1Q8WWA0 313 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 STON2Q8WXE9 905 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 NMD3Q96D46 503 aaKnown RBP7.11□□□□□ -1.27
TROAP-208ENST00000548817 TPD52L3Q96J77 140 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 SIKE1Q9BRV8 207 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 FNDC11Q9BVV2 318 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 SSBP3Q9BWW4 388 aaPredicted RBP7.11□□□□□ -1.27
TROAP-208ENST00000548817 EMC7Q9NPA0 242 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 POLE4Q9NR33 117 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 MRGBPQ9NV56 204 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 KIF17Q9P2E2 1029 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 MIOXQ9UGB7 285 aa7.11□□□□□ -1.27
TROAP-208ENST00000548817 PLXNB1O43157 2135 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 NOTCH3Q9UM47 2321 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 IGHV3OR16-10A0A075B7F0 116 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 A0A0G2JND7 137 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 FAM181BA6NEQ2 426 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 CEACAM18A8MTB9 384 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 A8MXK9 166 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 TMEM178BH3BS89 294 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 AHCYL1O43865 530 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 PIP5K1CO60331 668 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 NPPAP01160 153 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 TSPAN19P0C672 248 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 PPIAL4GP0DN37 164 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 RAC2P15153 192 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 SLC9A3P48764 834 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 RGS6P49758 472 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 PAX8Q06710 450 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 BNIP1Q12981 228 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 DOC2BQ14184 412 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 ENDOGQ14249 297 aaKnown RBP7.1□□□□□ -1.27
TROAP-208ENST00000548817 TRAM2Q15035 370 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 CYBRD1Q53TN4 286 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 SPRNQ5BIV9 151 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 METTL21CQ5VZV1 264 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 ZNF730Q6ZMV8 503 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 FOXL2NBQ6ZUU3 175 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 ARHGAP24Q8N264 748 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 PARP8Q8N3A8 854 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 OR8J3Q8NGG0 315 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 OR8B3Q8NGG8 313 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 RAB40AQ8WXH6 277 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 TAF15Q92804 592 aaKnown RBP eCLIP7.1□□□□□ -1.27
TROAP-208ENST00000548817 HAVCR1Q96D42 359 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 ZNF582Q96NG8 517 aaPredicted RBP7.1□□□□□ -1.27
TROAP-208ENST00000548817 OR2V2Q96R30 315 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 OR8B2Q96RD0 313 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 PRDM13Q9H4Q3 707 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 RERGLQ9H628 205 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 TCF7L1Q9HCS4 588 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 SAR1AQ9NR31 198 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 FGFR1OP2Q9NVK5 253 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 NECAP2Q9NVZ3 263 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 GID8Q9NWU2 228 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 DCAF16Q9NXF7 216 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 C1RLQ9NZP8 487 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 POLR1DQ9Y2S0 133 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 STARD10Q9Y365 291 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 RNF114Q9Y508 228 aa7.1□□□□□ -1.27
TROAP-208ENST00000548817 DNAH3Q8TD57 4116 aa7.09□□□□□ -1.27
TROAP-208ENST00000548817 TRAV27A0A087WT01 109 aa7.09□□□□□ -1.27
TROAP-208ENST00000548817 SRRM5B3KS81 715 aa7.09□□□□□ -1.27
TROAP-208ENST00000548817 F5H0A9 414 aaPredicted RBP7.09□□□□□ -1.27
TROAP-208ENST00000548817 H7C1C5 153 aa7.09□□□□□ -1.27
TROAP-208ENST00000548817 GSTA4O15217 222 aa7.09□□□□□ -1.27
TROAP-208ENST00000548817 EDF1O60869 148 aaKnown RBP7.09□□□□□ -1.27
TROAP-208ENST00000548817 KHDRBS3O75525 346 aaKnown RBP7.09□□□□□ -1.27
TROAP-208ENST00000548817 PRB2P02812 416 aaPredicted RBP7.09□□□□□ -1.27
TROAP-208ENST00000548817 OPN1MWP04001 364 aa7.09□□□□□ -1.27
TROAP-208ENST00000548817 IFNW1P05000 195 aa7.09□□□□□ -1.27
TROAP-208ENST00000548817 WNT2P09544 360 aa7.09□□□□□ -1.27
TROAP-208ENST00000548817 CSF1P09603 554 aa7.09□□□□□ -1.27
TROAP-208ENST00000548817 OPN1MW2P0DN77 364 aa7.09□□□□□ -1.27
TROAP-208ENST00000548817 OPN1MW3P0DN78 364 aa7.09□□□□□ -1.27
TROAP-208ENST00000548817 CD80P33681 288 aa7.09□□□□□ -1.27
TROAP-208ENST00000548817 KDELR2P33947 212 aa7.09□□□□□ -1.27
TROAP-208ENST00000548817 CENPAP49450 140 aa7.09□□□□□ -1.27
TROAP-208ENST00000548817 GZMMP51124 257 aa7.09□□□□□ -1.27
TROAP-208ENST00000548817 PROK1P58294 105 aa7.09□□□□□ -1.27
TROAP-208ENST00000548817 KRTAP10-3P60369 221 aa7.09□□□□□ -1.27
TROAP-208ENST00000548817 SEC61A1P61619 476 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms