RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 LHFPL6Q9Y693 200 aa14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 IGLV1-36A0A0B4J1U3 117 aa14.64□□□□□ -0.07
CHMP1A-205ENST00000548650 A8MXK9 166 aa14.64□□□□□ -0.07
CHMP1A-205ENST00000548650 PPP1R3DO95685 299 aa14.64□□□□□ -0.07
CHMP1A-205ENST00000548650 SBK2P0C263 348 aa14.64□□□□□ -0.07
CHMP1A-205ENST00000548650 CDKN2AP42771 156 aaKnown RBP14.64□□□□□ -0.07
CHMP1A-205ENST00000548650 RGS6P49758 472 aa14.64□□□□□ -0.07
CHMP1A-205ENST00000548650 HIST1H3AP68431 136 aa14.64□□□□□ -0.07
CHMP1A-205ENST00000548650 HLXQ14774 488 aaPredicted RBP14.64□□□□□ -0.07
CHMP1A-205ENST00000548650 MEP1BQ16820 701 aa14.64□□□□□ -0.07
CHMP1A-205ENST00000548650 TUSC1Q2TAM9 212 aa14.64□□□□□ -0.07
CHMP1A-205ENST00000548650 HIST2H3PS2Q5TEC6 136 aa14.64□□□□□ -0.07
CHMP1A-205ENST00000548650 FBXW12Q6X9E4 464 aa14.64□□□□□ -0.07
CHMP1A-205ENST00000548650 HIST2H3AQ71DI3 136 aa14.64□□□□□ -0.07
CHMP1A-205ENST00000548650 OR5AS1Q8N127 324 aa14.64□□□□□ -0.07
CHMP1A-205ENST00000548650 ZDHHC22Q8N966 263 aa14.64□□□□□ -0.07
CHMP1A-205ENST00000548650 FANK1Q8TC84 345 aa14.64□□□□□ -0.07
CHMP1A-205ENST00000548650 DVL3Q92997 716 aaPredicted RBP14.64□□□□□ -0.07
CHMP1A-205ENST00000548650 HDHD2Q9H0R4 259 aa14.64□□□□□ -0.07
CHMP1A-205ENST00000548650 AURKCQ9UQB9 309 aa14.64□□□□□ -0.07
CHMP1A-205ENST00000548650 PPP1R3CQ9UQK1 317 aa14.64□□□□□ -0.07
CHMP1A-205ENST00000548650 POLR1DQ9Y2S0 133 aa14.64□□□□□ -0.07
CHMP1A-205ENST00000548650 SURF4O15260 269 aa14.63□□□□□ -0.07
CHMP1A-205ENST00000548650 SEMG1P04279 462 aa14.63□□□□□ -0.07
CHMP1A-205ENST00000548650 SLC6A9P48067 706 aa14.63□□□□□ -0.07
CHMP1A-205ENST00000548650 RPS6KA3P51812 740 aa14.63□□□□□ -0.07
CHMP1A-205ENST00000548650 GLYATQ6IB77 296 aa14.63□□□□□ -0.07
CHMP1A-205ENST00000548650 PGM2L1Q6PCE3 622 aa14.63□□□□□ -0.07
CHMP1A-205ENST00000548650 SMARCD3Q6STE5 483 aa14.63□□□□□ -0.07
CHMP1A-205ENST00000548650 LRRC28Q86X40 367 aaPredicted RBP14.63□□□□□ -0.07
CHMP1A-205ENST00000548650 KLHL36Q8N4N3 616 aa14.63□□□□□ -0.07
CHMP1A-205ENST00000548650 RNF148Q8N7C7 305 aa14.63□□□□□ -0.07
CHMP1A-205ENST00000548650 OR10AD1Q8NGE0 317 aa14.63□□□□□ -0.07
CHMP1A-205ENST00000548650 OR52J3Q8NH60 311 aa14.63□□□□□ -0.07
CHMP1A-205ENST00000548650 C22orf15Q8WYQ4 148 aa14.63□□□□□ -0.07
CHMP1A-205ENST00000548650 PTP4A1Q93096 173 aa14.63□□□□□ -0.07
CHMP1A-205ENST00000548650 CMTM5Q96DZ9 223 aa14.63□□□□□ -0.07
CHMP1A-205ENST00000548650 COQ7Q99807 217 aa14.63□□□□□ -0.07
CHMP1A-205ENST00000548650 GCM1Q9NP62 436 aa14.63□□□□□ -0.07
CHMP1A-205ENST00000548650 KRCC1Q9NPI7 259 aaPredicted RBP14.63□□□□□ -0.07
CHMP1A-205ENST00000548650 PTTG3PQ9NZH4 202 aa14.63□□□□□ -0.07
CHMP1A-205ENST00000548650 V9GYQ6 96 aa14.63□□□□□ -0.07
CHMP1A-205ENST00000548650 TRAPPC2LH3BP13 241 aa14.62□□□□□ -0.07
CHMP1A-205ENST00000548650 TMEM178BH3BS89 294 aa14.62□□□□□ -0.07
CHMP1A-205ENST00000548650 ATP8B1O43520 1251 aa14.62□□□□□ -0.07
CHMP1A-205ENST00000548650 ZNF12P17014 697 aa14.62□□□□□ -0.07
CHMP1A-205ENST00000548650 CRABP1P29762 137 aa14.62□□□□□ -0.07
CHMP1A-205ENST00000548650 DBPQ10586 325 aaPredicted RBP14.62□□□□□ -0.07
CHMP1A-205ENST00000548650 COX10Q12887 443 aa14.62□□□□□ -0.07
CHMP1A-205ENST00000548650 OR2T2Q6IF00 324 aa14.62□□□□□ -0.07
CHMP1A-205ENST00000548650 DNM1P34Q6PK57 102 aa14.62□□□□□ -0.07
CHMP1A-205ENST00000548650 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.62□□□□□ -0.07
CHMP1A-205ENST00000548650 SLC26A10Q8NG04 563 aa14.62□□□□□ -0.07
CHMP1A-205ENST00000548650 GCDHQ92947 438 aaPredicted RBP14.62□□□□□ -0.07
CHMP1A-205ENST00000548650 POP5Q969H6 163 aaKnown RBP14.62□□□□□ -0.07
CHMP1A-205ENST00000548650 APOBEC3DQ96AK3 386 aaPredicted RBP14.62□□□□□ -0.07
CHMP1A-205ENST00000548650 PLA2G12AQ9BZM1 189 aa14.62□□□□□ -0.07
CHMP1A-205ENST00000548650 OR52D1Q9H346 318 aa14.62□□□□□ -0.07
CHMP1A-205ENST00000548650 DOCK11Q5JSL3 2073 aa14.61□□□□□ -0.07
CHMP1A-205ENST00000548650 CEACAM18A8MTB9 384 aa14.61□□□□□ -0.07
CHMP1A-205ENST00000548650 FPR3P25089 353 aa14.61□□□□□ -0.07
CHMP1A-205ENST00000548650 PRDX6P30041 224 aa14.61□□□□□ -0.07
CHMP1A-205ENST00000548650 MDH2P40926 338 aaKnown RBP14.61□□□□□ -0.07
CHMP1A-205ENST00000548650 UBA52P62987 128 aaKnown RBP14.61□□□□□ -0.07
CHMP1A-205ENST00000548650 ZNF154Q13106 437 aa14.61□□□□□ -0.07
CHMP1A-205ENST00000548650 KRTAP27-1Q3LI81 207 aa14.61□□□□□ -0.07
CHMP1A-205ENST00000548650 ARMCX4Q5H9R4 360 aa14.61□□□□□ -0.07
CHMP1A-205ENST00000548650 CORO6Q6QEF8 472 aa14.61□□□□□ -0.07
CHMP1A-205ENST00000548650 MUC20Q8N307 709 aaPredicted RBP14.61□□□□□ -0.07
CHMP1A-205ENST00000548650 GJC3Q8NFK1 279 aa14.61□□□□□ -0.07
CHMP1A-205ENST00000548650 OR8G5Q8NG78 346 aa14.61□□□□□ -0.07
CHMP1A-205ENST00000548650 MEGF10Q96KG7 1140 aa14.61□□□□□ -0.07
CHMP1A-205ENST00000548650 ERMAPQ96PL5 475 aaPredicted RBP14.61□□□□□ -0.07
CHMP1A-205ENST00000548650 GORASP2Q9H8Y8 452 aa14.61□□□□□ -0.07
CHMP1A-205ENST00000548650 ADA2Q9NZK5 511 aa14.61□□□□□ -0.07
CHMP1A-205ENST00000548650 INSIG2Q9Y5U4 225 aa14.61□□□□□ -0.07
CHMP1A-205ENST00000548650 MGAM2Q2M2H8 2515 aa14.61□□□□□ -0.07
CHMP1A-205ENST00000548650 A0A1B0GWJ7 208 aa14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 ARPC3O15145 178 aa14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 MLNRO43193 412 aa14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 SLC6A6P31641 620 aa14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 CENPAP49450 140 aa14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 SPIBQ01892 262 aa14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 KRT72Q14CN4 511 aa14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 RSPO1Q2MKA7 263 aaPredicted RBP14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 KLF17Q5JT82 389 aaPredicted RBP14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 LEG1Q6P5S2 330 aa14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 CFAP77Q6ZQR2 320 aa14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 COLCA1Q6ZS62 124 aa14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 OR6V1Q8N148 313 aa14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 ATG16L2Q8NAA4 619 aa14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 OR5L1Q8NGL2 311 aa14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 ZNF420Q8TAQ5 688 aaPredicted RBP14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 NMNAT3Q96T66 252 aa14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 ELAC2Q9BQ52 826 aaKnown RBP14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 SLC30A2Q9BRI3 323 aa14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 MAGEL2Q9UJ55 1249 aa14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 B9D1Q9UPM9 204 aa14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 LRCH1Q9Y2L9 728 aa14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 PPIAL4AQ9Y536 164 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms