RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ZFAND2BQ8WV99 257 aa11.24□□□□□ -0.61
CPSF6-204ENST00000547486 OR2V2Q96R30 315 aa11.24□□□□□ -0.61
CPSF6-204ENST00000547486 NMNAT3Q96T66 252 aa11.24□□□□□ -0.61
CPSF6-204ENST00000547486 IL19Q9UHD0 177 aa11.24□□□□□ -0.61
CPSF6-204ENST00000547486 H0YL77 283 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 GMNNO75496 209 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 HSD17B1P14061 328 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 HIST1H1CP16403 213 aaKnown RBP11.23□□□□□ -0.61
CPSF6-204ENST00000547486 TNFRSF1AP19438 455 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 TNFSF4P23510 183 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 GATA3P23771 443 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 SLC6A9P48067 706 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 SPIBQ01892 262 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 KRTAP27-1Q3LI81 207 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 OR2T2Q6IF00 324 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 LEG1Q6P5S2 330 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 C12orf54Q6X4T0 127 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 FBXW12Q6X9E4 464 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 USP43Q70EL4 1123 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 NAA40Q86UY6 237 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 ATG16L2Q8NAA4 619 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 GJC3Q8NFK1 279 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 SLC26A10Q8NG04 563 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 OR4K13Q8NH42 304 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 NANPQ8TBE9 248 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 ST7LQ8TDW4 575 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 C22orf15Q8WYQ4 148 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 COG8Q96MW5 612 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 CDRT15Q96T59 188 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 SLC6A7Q99884 636 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 OR52D1Q9H346 318 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 WDR76Q9H967 626 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 PATZ1Q9HBE1 687 aaKnown RBP11.23□□□□□ -0.61
CPSF6-204ENST00000547486 GCM1Q9NP62 436 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 ESM1Q9NQ30 184 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 PPP1R3CQ9UQK1 317 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 ARHGAP32A7KAX9 2087 aa11.23□□□□□ -0.61
CPSF6-204ENST00000547486 IGHV3-64DA0A0J9YX35 117 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 OR6C68A6NDL8 312 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 TMEM178BH3BS89 294 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 ARPC3O15145 178 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 FPR3P25089 353 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 CFPP27918 469 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 CRABP1P29762 137 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 PRSS12P56730 875 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 SMIM11AP58511 58 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 BTG1P62324 171 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 COX10Q12887 443 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 SCGB2A2Q13296 93 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 TMEM155Q4W5P6 130 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 CFAP77Q6ZQR2 320 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 COLCA1Q6ZS62 124 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 LINC00346Q8IVM7 164 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 KLHL36Q8N4N3 616 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 TEX29Q8N6K0 151 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 DEFB108BQ8NET1 73 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 OR8G5Q8NG78 346 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 OR10AD1Q8NGE0 317 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 ZNF420Q8TAQ5 688 aaPredicted RBP11.22□□□□□ -0.61
CPSF6-204ENST00000547486 FANK1Q8TC84 345 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 FAM216AQ8WUB2 273 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 DVL3Q92997 716 aaPredicted RBP11.22□□□□□ -0.61
CPSF6-204ENST00000547486 APOBEC3DQ96AK3 386 aaPredicted RBP11.22□□□□□ -0.61
CPSF6-204ENST00000547486 COQ7Q99807 217 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 IFT27Q9BW83 186 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 FN3KQ9H479 309 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 KRCC1Q9NPI7 259 aaPredicted RBP11.22□□□□□ -0.61
CPSF6-204ENST00000547486 RPRD1BQ9NQG5 326 aaKnown RBP11.22□□□□□ -0.61
CPSF6-204ENST00000547486 ARL8BQ9NVJ2 186 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 ATPIF1Q9UII2 106 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 POLR1DQ9Y2S0 133 aa11.22□□□□□ -0.61
CPSF6-204ENST00000547486 PPIAL4EA0A075B759 164 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 PPIAL4CA0A0B4J2A2 164 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 F5H0A9 414 aaPredicted RBP11.21□□□□□ -0.61
CPSF6-204ENST00000547486 PPIAL4DF5H284 164 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 J3QW42 95 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 ARPC2O15144 300 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 MLNRO43193 412 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 OR10H3O60404 316 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 FOXH1O75593 365 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 ZNF205O95201 554 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 PPIAL4FP0DN26 164 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 RRM2P31350 389 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 SLC6A6P31641 620 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 GGT2P36268 569 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 PMELP40967 661 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 GSSP48637 474 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 RGS6P49758 472 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 MMP16P51512 607 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 GYS2P54840 703 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 KLF17Q5JT82 389 aaPredicted RBP11.21□□□□□ -0.61
CPSF6-204ENST00000547486 SLC35F1Q5T1Q4 408 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 SLC18B1Q6NT16 456 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 CPLX4Q7Z7G2 160 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 ZBTB46Q86UZ6 589 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 JAZF1Q86VZ6 243 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 PGAM4Q8N0Y7 254 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 SPICQ8N5J4 248 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 ZDHHC22Q8N966 263 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 OR5L1Q8NGL2 311 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms