RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 TTC28Q96AY4 2481 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 NAT1P18440 290 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 IL32P24001 234 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 CARD18P57730 90 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 DYRK1AQ13627 763 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 PPA1Q15181 289 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 RELL2Q8NC24 303 aaPredicted RBP14.12□□□□□ -0.15
CUX1-211ENST00000546411 C11orf40Q8WZ69 217 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 C4orf45Q96LM5 186 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 CCDC74BQ96LY2 380 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 RAB22AQ9UL26 194 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 LPLP06858 475 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 ZNF806P0C7X5 589 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 ABOP16442 354 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 EPHA1P21709 976 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 FASLGP48023 281 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 ESCO2Q56NI9 601 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 OR52W1Q6IF63 320 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 SHISA5Q8N114 240 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 VRK1Q99986 396 aaPredicted RBP14.12□□□□□ -0.15
CUX1-211ENST00000546411 TINAGL1Q9GZM7 467 aaPredicted RBP14.12□□□□□ -0.15
CUX1-211ENST00000546411 FBXO4Q9UKT5 387 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 BET1O15155 118 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 ZIC2O95409 532 aaPredicted RBP14.12□□□□□ -0.15
CUX1-211ENST00000546411 THBS2P35442 1172 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 CYCSP99999 105 aaKnown RBP14.12□□□□□ -0.15
CUX1-211ENST00000546411 SLC25A30Q5SVS4 291 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 B3GNTL1Q67FW5 361 aaPredicted RBP14.12□□□□□ -0.15
CUX1-211ENST00000546411 STX12Q86Y82 276 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 SMRP1Q8NCR6 262 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 OR56B1Q8NGI3 324 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 FNDC9Q8TBE3 224 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 PIGLQ9Y2B2 252 aa14.12□□□□□ -0.15
CUX1-211ENST00000546411 GLULP15104 373 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 ACHEP22303 614 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 MYBPHQ13203 477 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 EXOSC2Q13868 293 aaKnown RBP14.11□□□□□ -0.15
CUX1-211ENST00000546411 CDONQ4KMG0 1287 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 OR1M1Q8NGA1 313 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 PTTG3PQ9NZH4 202 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 TMEM229AB2RXF0 380 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 ADH6P28332 368 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 SLC37A1P57057 533 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 IL10RAQ13651 578 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 DCAF12Q5T6F0 453 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 TMEM71Q6P5X7 295 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 ZNF813Q6ZN06 617 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 VWCEQ96DN2 955 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 CCNL2Q96S94 520 aaPredicted RBP14.11□□□□□ -0.15
CUX1-211ENST00000546411 BORCS7-ASMTA0A0B4J1R7 106 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 DCTN6O00399 190 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 ICMTO60725 284 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 ADRA2AP08913 450 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 POU2F2P09086 479 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 MESTQ5EB52 335 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 LSMEM1Q8N8F7 131 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 PTPMT1Q8WUK0 201 aaPredicted RBP14.11□□□□□ -0.15
CUX1-211ENST00000546411 TM4SF19Q96DZ7 209 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 GPR173Q9NS66 373 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 FRRS1LQ9P0K9 344 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 POLEQ07864 2286 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 OR8U9P0C7N5 309 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 EDN3P14138 238 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 ALOX5APP20292 161 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 OPRM1P35372 400 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 EIF1P41567 113 aaKnown RBP14.11□□□□□ -0.15
CUX1-211ENST00000546411 ST8SIA1Q92185 356 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 SMOC1Q9H4F8 434 aa14.11□□□□□ -0.15
CUX1-211ENST00000546411 SPTAN1Q13813 2472 aaKnown RBP14.1□□□□□ -0.15
CUX1-211ENST00000546411 ZSWIM8A7E2V4 1837 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 TRAV8-7A0A075B6U6 113 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 FAM166BA8MTA8 275 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 CER1O95813 267 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 DDAH2O95865 285 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 NGFRP08138 427 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 PPP3CBP16298 524 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 NAGAP17050 411 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 SLC6A1P30531 599 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 STK11Q15831 433 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 HLA-BQ31612 363 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 CLVS2Q5SYC1 327 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 CCDC54Q8NEL0 328 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 GJC3Q8NFK1 279 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 SLC25A21Q9BQT8 299 aaPredicted RBP14.1□□□□□ -0.15
CUX1-211ENST00000546411 PBOV1Q9GZY1 135 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 GDF2Q9UK05 429 aaPredicted RBP14.1□□□□□ -0.15
CUX1-211ENST00000546411 B3GALT5Q9Y2C3 310 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 R4GMQ9 66 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 CACNA1HO95180 2353 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 ALG1L2C9J202 215 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 RER1O15258 196 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 MBTPS2O43462 519 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 SSX5O60225 188 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 THY1P04216 161 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 ZNF44P15621 663 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 RGS19P49795 217 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 PWWP2BQ6NUJ5 590 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 NKAIN3Q8N8D7 197 aa14.1□□□□□ -0.15
CUX1-211ENST00000546411 TMIGD3P0DMS9 266 aaPredicted RBP14.1□□□□□ -0.15
CUX1-211ENST00000546411 NANOS3P60323 173 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms