RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 IL1RAPQ9NPH3 570 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 G6PC2Q9NQR9 355 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 UBAP1Q9NZ09 502 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 CD300AQ9UGN4 299 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 IL19Q9UHD0 177 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 B9D1Q9UPM9 204 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 CACNG2Q9Y698 323 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.92□□□□□ -1.142e-6■■■■□ 23.2
YBX3-218ENST00000546298 PPIAL4EA0A075B759 164 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 PPIAL4CA0A0B4J2A2 164 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 PPIAL4DF5H284 164 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 ARPC2O15144 300 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 SEMG1P04279 462 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 PPIAL4FP0DN26 164 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 SELEP16581 610 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 CPT2P23786 658 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 RRM2P31350 389 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 SRP9P49458 86 aaKnown RBP7.92□□□□□ -1.14
YBX3-218ENST00000546298 GNGT1P63211 74 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 HIST1H3AP68431 136 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 SRSF2Q01130 221 aaKnown RBP7.92□□□□□ -1.14
YBX3-218ENST00000546298 COX10Q12887 443 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 TMEM155Q4W5P6 130 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 TMEM255AQ5JRV8 349 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 HIST2H3PS2Q5TEC6 136 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 LEG1Q6P5S2 330 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 FBXW12Q6X9E4 464 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 HIST2H3AQ71DI3 136 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.92□□□□□ -1.14
YBX3-218ENST00000546298 ZDHHC21Q8IVQ6 265 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 DEFB107AQ8IZN7 70 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 KLHL36Q8N4N3 616 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 ZNF283Q8N7M2 679 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 ATG16L2Q8NAA4 619 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 OR8G5Q8NG78 346 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 OR52L1Q8NGH7 329 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 OR13G1Q8NGZ3 307 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 SLC7A6Q92536 515 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 POP5Q969H6 163 aaKnown RBP7.92□□□□□ -1.14
YBX3-218ENST00000546298 NMNAT3Q96T66 252 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 GPA33Q99795 319 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 HCAR1Q9BXC0 346 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 C7orf69Q9H7B7 122 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 KCNG2Q9UJ96 466 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 PPP1R3CQ9UQK1 317 aa7.92□□□□□ -1.14
YBX3-218ENST00000546298 STAB1Q9NY15 2570 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 IGLV1-36A0A0B4J1U3 117 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 TRIM77I1YAP6 450 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 IGHV2-70P01814 119 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 HLA-DQA2P01906 255 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 HIST1H1CP16403 213 aaKnown RBP7.91□□□□□ -1.14
YBX3-218ENST00000546298 EPHA1P21709 976 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 FPR2P25090 351 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 MDH2P40926 338 aaKnown RBP7.91□□□□□ -1.14
YBX3-218ENST00000546298 GSSP48637 474 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 TSPAN31Q12999 210 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 OTPQ5XKR4 325 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 Q6ZR03 302 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 USP43Q70EL4 1123 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 C1QL2Q7Z5L3 287 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 PIGWQ7Z7B1 504 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 ZBTB46Q86UZ6 589 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 LRRC28Q86X40 367 aaPredicted RBP7.91□□□□□ -1.14
YBX3-218ENST00000546298 OR6V1Q8N148 313 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 ARHGAP24Q8N264 748 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 MUC20Q8N307 709 aaPredicted RBP7.91□□□□□ -1.14
YBX3-218ENST00000546298 SLC26A10Q8NG04 563 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 ITLN1Q8WWA0 313 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 TSSK2Q96PF2 358 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 PITX2Q99697 317 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 SUCNR1Q9BXA5 334 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 TMPRSS13Q9BYE2 586 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 POFUT1Q9H488 388 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 PATZ1Q9HBE1 687 aaKnown RBP7.91□□□□□ -1.14
YBX3-218ENST00000546298 RPRD1BQ9NQG5 326 aaKnown RBP7.91□□□□□ -1.14
YBX3-218ENST00000546298 ARL8BQ9NVJ2 186 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 PTTG3PQ9NZH4 202 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 LHFPL6Q9Y693 200 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 CDH10Q9Y6N8 788 aa7.91□□□□□ -1.14
YBX3-218ENST00000546298 LOC105371242A0A075B767 164 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 LRRC30A6NM36 301 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 TNFRSF11BO00300 401 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 DCTN6O00399 190 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 VENTXO95231 258 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 DBHP09172 617 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 ZNF823P16415 610 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 MSX2P35548 267 aaPredicted RBP7.9□□□□□ -1.14
YBX3-218ENST00000546298 HMGA2P52926 109 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 TPTEP56180 551 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 BTG1P62324 171 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 LCN2P80188 198 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.9□□□□□ -1.14
YBX3-218ENST00000546298 MALLQ13021 153 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 MEP1BQ16820 701 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 SPRNQ5BIV9 151 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 OR2T2Q6IF00 324 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 PGBD2Q6P3X8 592 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 CORO6Q6QEF8 472 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 C12orf54Q6X4T0 127 aa7.9□□□□□ -1.14
YBX3-218ENST00000546298 ZNF620Q6ZNG0 422 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms