RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 ADAM10O14672 748 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 OR2C1O95371 312 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 OLFM2O95897 454 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 ST6GAL1P15907 406 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 LAP3P28838 519 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 TEX19Q8NA77 164 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 OR5L1Q8NGL2 311 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 RAB39BQ96DA2 213 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 NKX3-1Q99801 234 aaPredicted RBP11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 ZNF2Q9BSG1 426 aaPredicted RBP11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 SLC5A6Q9Y289 635 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 SCRG1O75711 98 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 DFFBO76075 338 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 ZFPL1O95159 310 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 CXCL10P02778 98 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 PI3P19957 117 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 GDF1P27539 372 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 SHEQ5VZ18 495 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 CPEB2Q7Z5Q1 589 aaKnown RBP11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 OR1S2Q8NGQ3 325 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 CCL4L1Q8NHW4 92 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 SFT2D1Q8WV19 159 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 SAMD10Q9BYL1 202 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 SLC17A5Q9NRA2 495 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 B9D1Q9UPM9 204 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 STRAPQ9Y3F4 350 aaKnown RBP11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 ZFC3H1O60293 1989 aaKnown RBP11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 PRAMEF25A6NGN4 478 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 DCTN6O00399 190 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 SDCBPO00560 298 aaPredicted RBP11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 ITGBL1O95965 494 aaPredicted RBP11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 HPNP05981 417 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 H2AFB1P0C5Y9 115 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 SDHBP21912 280 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 METAP1P53582 386 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 F2RL1P55085 397 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 ZNF626Q68DY1 528 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 TMEM182Q6ZP80 229 aaPredicted RBP11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 DPPA2Q7Z7J5 298 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 LSMEM1Q8N8F7 131 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 MORN4Q8NDC4 146 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 PPP1R35Q8TAP8 253 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 EDAQ92838 391 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 TMEM68Q96MH6 324 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 TINAGL1Q9GZM7 467 aaPredicted RBP11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 PLEKHA2Q9HB19 425 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 TUBG2Q9NRH3 451 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 OR5V1Q9UGF6 321 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 CYB5R1Q9UHQ9 305 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 ACAD8Q9UKU7 415 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 URGCP-MRPS24S4R325 110 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 ZNF354AO60765 605 aaPredicted RBP11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 ICOSLGO75144 302 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 SLC25A1P53007 311 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 NR0B2Q15466 257 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 CDKN3Q16667 212 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 ATPAF1Q5TC12 328 aaPredicted RBP11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 NKAIN2Q5VXU1 208 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 TMEM71Q6P5X7 295 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 SSX9Q7RTT3 188 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 ANKRD33Q7Z3H0 272 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 MUC20Q8N307 709 aaPredicted RBP11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 CPT1CQ8TCG5 803 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 FBLIM1Q8WUP2 373 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 OR51B6Q9H340 312 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 FN3KRPQ9HA64 309 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 BCO1Q9HAY6 547 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 GCM1Q9NP62 436 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 OR6C76A6NM76 312 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 CDC42EP2O14613 210 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 PRAMEF4O60810 478 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 IL2RGP31785 369 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 NKX2-1P43699 371 aaPredicted RBP11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 GPR85P60893 370 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 AGBL4Q5VU57 503 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 OTPQ5XKR4 325 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 OR8B4Q96RC9 309 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 SLC17A4Q9Y2C5 497 aa11.08□□□□□ -0.64
NPC1L1-204ENST00000546276 A0A087WZY1 265 aa11.07□□□□□ -0.64
NPC1L1-204ENST00000546276 NSG1A0A0A6YYJ2 146 aa11.07□□□□□ -0.64
NPC1L1-204ENST00000546276 LINC01553A4QN01 128 aa11.07□□□□□ -0.64
NPC1L1-204ENST00000546276 ARPC3O15145 178 aa11.07□□□□□ -0.64
NPC1L1-204ENST00000546276 MRPL33O75394 65 aaKnown RBP11.07□□□□□ -0.64
NPC1L1-204ENST00000546276 MPPED2Q15777 294 aa11.07□□□□□ -0.64
NPC1L1-204ENST00000546276 OR4D11Q8NGI4 311 aa11.07□□□□□ -0.64
NPC1L1-204ENST00000546276 SLC25A43Q8WUT9 341 aaPredicted RBP11.07□□□□□ -0.64
NPC1L1-204ENST00000546276 ZNF764Q96H86 408 aaPredicted RBP11.07□□□□□ -0.64
NPC1L1-204ENST00000546276 SPACA5Q96QH8 159 aa11.07□□□□□ -0.64
NPC1L1-204ENST00000546276 ASH2LQ9UBL3 628 aa11.07□□□□□ -0.64
NPC1L1-204ENST00000546276 FBXO4Q9UKT5 387 aa11.07□□□□□ -0.64
NPC1L1-204ENST00000546276 SCGB1D1O95968 90 aa11.07□□□□□ -0.64
NPC1L1-204ENST00000546276 IGHA1P01876 353 aa11.07□□□□□ -0.64
NPC1L1-204ENST00000546276 GSTP1P09211 210 aaKnown RBP11.07□□□□□ -0.64
NPC1L1-204ENST00000546276 RRASP10301 218 aa11.07□□□□□ -0.64
NPC1L1-204ENST00000546276 MSR1P21757 451 aa11.07□□□□□ -0.64
NPC1L1-204ENST00000546276 AADACP22760 399 aa11.07□□□□□ -0.64
NPC1L1-204ENST00000546276 CSRP3P50461 194 aa11.07□□□□□ -0.64
NPC1L1-204ENST00000546276 DCDP81605 110 aaKnown RBP11.07□□□□□ -0.64
NPC1L1-204ENST00000546276 C19orf57Q0VDD7 668 aa11.07□□□□□ -0.64
NPC1L1-204ENST00000546276 EIF4EBP2Q13542 120 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms