RNA–Protein interactions for RNA: ENST00000545549.1

LINC01965-204, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 4 BASIC

Gene LINC01965, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-204ENST00000545549 PTP4A1Q93096 173 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 ANKRD9Q96BM1 317 aaPredicted RBP3.22□□□□□ -1.89
LINC01965-204ENST00000545549 CTHRC1Q96CG8 243 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 FOXRED1Q96CU9 486 aaPredicted RBP3.22□□□□□ -1.89
LINC01965-204ENST00000545549 CLIP3Q96DZ5 547 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 RBMXL1Q96E39 390 aaKnown RBP3.22□□□□□ -1.89
LINC01965-204ENST00000545549 C14orf79Q96F83 325 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 TRMT61AQ96FX7 289 aaKnown RBP3.22□□□□□ -1.89
LINC01965-204ENST00000545549 LCORQ96JN0 433 aaPredicted RBP3.22□□□□□ -1.89
LINC01965-204ENST00000545549 IP6K3Q96PC2 410 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 OR1F2PQ96R84 312 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 GAL3ST4Q96RP7 486 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 INTS14Q96SY0 518 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 NMNAT3Q96T66 252 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 WFDC6Q9BQY6 131 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 ALG12Q9BV10 488 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 BEX2Q9BXY8 128 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 POTEKPQ9BYX7 375 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 VN1R1Q9GZP7 353 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 ZNF700Q9H0M5 742 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 WDR76Q9H967 626 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 FKRPQ9H9S5 495 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 MCCC2Q9HCC0 563 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 CHST11Q9NPF2 352 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 TMEM138Q9NPI0 162 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 SDHAF3Q9NRP4 125 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 SERINC1Q9NRX5 453 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 C20orf141Q9NUB4 165 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 P4HTMQ9NXG6 502 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 B3GNT2Q9NY97 397 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 COMMD9Q9P000 198 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 MED11Q9P086 117 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 HCN3Q9P1Z3 774 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 EIF3KQ9UBQ5 218 aaKnown RBP3.22□□□□□ -1.89
LINC01965-204ENST00000545549 CHRNA9Q9UGM1 479 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 UBQLN2Q9UHD9 624 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 MGAT4AQ9UM21 535 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 ICAM5Q9UMF0 924 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 GTF2A1LQ9UNN4 478 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 DHDHQ9UQ10 334 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 ERVK-19Q9WJR5 959 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 NTNG1Q9Y2I2 539 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 AK6Q9Y3D8 172 aaKnown RBP3.22□□□□□ -1.89
LINC01965-204ENST00000545549 MAB21L2Q9Y586 359 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 KLF2Q9Y5W3 355 aaPredicted RBP3.22□□□□□ -1.89
LINC01965-204ENST00000545549 MAU2Q9Y6X3 613 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 NCOA6Q14686 2063 aaPredicted RBP3.22□□□□□ -1.89
LINC01965-204ENST00000545549 PLCE1Q9P212 2302 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 PRR14LQ5THK1 2151 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 ALPK2Q86TB3 2170 aa3.22□□□□□ -1.89
LINC01965-204ENST00000545549 INTS1Q8N201 2190 aaKnown RBP3.21□□□□□ -1.9
LINC01965-204ENST00000545549 TRAV36DV7A0A075B6V5 113 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 A0A0A6YYJ9 748 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 A0A1W2PPK0 400 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 A0A1W2PS29 197 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 TCRBV16S1A1N1A0A5B0 115 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 TUBAL3A6NHL2 446 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 SNRPGP15A8MWD9 76 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 IDSB3KWA1 339 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 DISC1C4P0D8 188 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 NPIPA5E9PKD4 350 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 J3QRE1 110 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 L7N2F9 121 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 M0R233 179 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 AGRPO00253 132 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 ADAM10O14672 748 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 HCRTR2O43614 444 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 SCO2O43819 266 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 SSX4O60224 188 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 ZNF780AO75290 641 aaPredicted RBP3.21□□□□□ -1.9
LINC01965-204ENST00000545549 ZNF254O75437 659 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 CDC123O75794 336 aaPredicted RBP3.21□□□□□ -1.9
LINC01965-204ENST00000545549 UTS2O95399 124 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 TGM6O95932 706 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 LALBAP00709 142 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 RLN1P04808 185 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 GYPBP06028 91 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 THBDP07204 575 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 KLK3P07288 261 aaPredicted RBP3.21□□□□□ -1.9
LINC01965-204ENST00000545549 ERCC1P07992 297 aaPredicted RBP3.21□□□□□ -1.9
LINC01965-204ENST00000545549 ADRA2AP08913 450 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 CD63P08962 238 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 CD3GP09693 182 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 CT62P0C5K7 136 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 AKAIN1P0CW23 69 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 NAT2P11245 290 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 COX6A1P12074 109 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 PSMB1P20618 241 aaKnown RBP3.21□□□□□ -1.9
LINC01965-204ENST00000545549 PTNP21246 168 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 TBXA2RP21731 343 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 SLC2A5P22732 501 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 AGTR1P30556 359 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 ACAA2P42765 397 aaKnown RBP3.21□□□□□ -1.9
LINC01965-204ENST00000545549 OR1D4P47884 311 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 EMDP50402 254 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 DAP3P51398 398 aaKnown RBP3.21□□□□□ -1.9
LINC01965-204ENST00000545549 POLR2HP52434 150 aaKnown RBP3.21□□□□□ -1.9
LINC01965-204ENST00000545549 MAP2K6P52564 334 aa3.21□□□□□ -1.9
LINC01965-204ENST00000545549 RIDAP52758 137 aaKnown RBP3.21□□□□□ -1.9
LINC01965-204ENST00000545549 RAP2BP61225 183 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms