RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 SERPINA5P05154 406 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 JMJD7P0C870 316 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 ZNF28P17035 718 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 GABRR1P24046 479 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 SLC6A1P30531 599 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 CALCRP30988 508 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 ARL3P36405 182 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 CX3CR1P49238 355 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 SSR4P51571 173 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 NDUFA6P56556 154 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 RNF4P78317 190 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 SRSF5Q13243 272 aaKnown RBP5.23□□□□□ -1.57
VPS50-220ENST00000544910 COTL1Q14019 142 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 KIAA0141Q14154 515 aaPredicted RBP5.23□□□□□ -1.57
VPS50-220ENST00000544910 PRTGQ2VWP7 1150 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 C19orf48Q6RUI8 117 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 MRGPREQ86SM8 312 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 TDHQ8IZJ6 230 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 LRRC18Q8N456 261 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 NPEPL1Q8NDH3 523 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 PLPP5Q8NEB5 264 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 SEMA6DQ8NFY4 1073 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.23□□□□□ -1.57
VPS50-220ENST00000544910 SLAMF6Q96DU3 332 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 RAB3CQ96E17 227 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 DDOQ99489 341 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 SLC25A21Q9BQT8 299 aaPredicted RBP5.23□□□□□ -1.57
VPS50-220ENST00000544910 UCK1Q9HA47 277 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 PLEKHJ1Q9NW61 149 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 CYB5R1Q9UHQ9 305 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 LSM5Q9Y4Y9 91 aaKnown RBP5.23□□□□□ -1.57
VPS50-220ENST00000544910 ANKRD61A6NGH8 418 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 TMEM200CA6NKL6 621 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 IDSB3KWA1 339 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 OR2F2O95006 317 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 CER1O95813 267 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 TBX6O95947 436 aaPredicted RBP5.23□□□□□ -1.57
VPS50-220ENST00000544910 PMP2P02689 132 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 SMIM10L1P0DMW3 83 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 APEHP13798 732 aaKnown RBP5.23□□□□□ -1.57
VPS50-220ENST00000544910 GLB1P16278 677 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 DCTDP32321 178 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 GPR3P46089 330 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 PPT1P50897 306 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 SUMO3P55854 103 aaPredicted RBP5.23□□□□□ -1.57
VPS50-220ENST00000544910 SCAND1P57086 179 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 SEC61A1P61619 476 aaKnown RBP5.23□□□□□ -1.57
VPS50-220ENST00000544910 HTD2P86397 168 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 MALLQ13021 153 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 OR2F1Q13607 317 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 ST3GAL2Q16842 350 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 SOHLH1Q5JUK2 328 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 THEM4Q5T1C6 240 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 CD200R1LQ6Q8B3 271 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 ZNF705AQ6ZN79 300 aaPredicted RBP5.23□□□□□ -1.57
VPS50-220ENST00000544910 ATG4DQ86TL0 474 aaPredicted RBP5.23□□□□□ -1.57
VPS50-220ENST00000544910 OR5M1Q8NGP8 315 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 OR4C3Q8NH37 302 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 GLYATL2Q8WU03 294 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 HLA-CQ95604 372 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 SMIM10Q96HG1 83 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 OR8B4Q96RC9 309 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 SEMA4CQ9C0C4 833 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 PCED1AQ9H1Q7 454 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 SLC17A5Q9NRA2 495 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 PCDHGA5Q9Y5G8 931 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 MEIKINA0A087WXM9 373 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 IGHV1OR15-9A0A0B4J2B8 117 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 TMEM229AB2RXF0 380 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 HRKO00198 91 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 HYAL3O43820 417 aaPredicted RBP5.22□□□□□ -1.57
VPS50-220ENST00000544910 PLXNA2O75051 1894 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 GLSO94925 669 aaPredicted RBP5.22□□□□□ -1.57
VPS50-220ENST00000544910 SIX6O95475 246 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 CD1AP06126 327 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 ZNF93P35789 620 aaPredicted RBP5.22□□□□□ -1.57
VPS50-220ENST00000544910 ACAA2P42765 397 aaKnown RBP5.22□□□□□ -1.57
VPS50-220ENST00000544910 RAG2P55895 527 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 UQCC3Q6UW78 93 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 TEX261Q6UWH6 196 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 CADM4Q8NFZ8 388 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 OR1L3Q8NH93 324 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 KCNG3Q8TAE7 436 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 GCDHQ92947 438 aaPredicted RBP5.22□□□□□ -1.57
VPS50-220ENST00000544910 AICDAQ9GZX7 198 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 PLXNA4Q9HCM2 1894 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 KLK11Q9UBX7 282 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 SLC23A1Q9UHI7 598 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 SLC22A13Q9Y226 551 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 SF3B6Q9Y3B4 125 aaKnown RBP5.22□□□□□ -1.57
VPS50-220ENST00000544910 U3KQ87 197 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 GPANK1O95872 356 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 F10P00742 488 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 IGHEP01854 428 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 MBP02144 154 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 RPS27P42677 84 aaKnown RBP5.22□□□□□ -1.57
VPS50-220ENST00000544910 SMAD2Q15796 467 aaKnown RBP5.22□□□□□ -1.57
VPS50-220ENST00000544910 LINC00303Q3SY05 128 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 SLC22A6Q4U2R8 563 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 MESTQ5EB52 335 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms