RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-219	ENST00000543660	NOA1	Q8NC60	698 aa	Known RBP	4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	OR9K2	Q8NGE7	335 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	OCC1	Q8TAD7	63 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ZNF671	Q8TAW3	534 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ZNF483	Q8TF39	744 aa	Predicted RBP	4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	C2CD4C	Q8TF44	421 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	TMEM170A	Q8WVE7	144 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	DNAJA4	Q8WW22	397 aa	Predicted RBP	4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CDKL2	Q92772	493 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CDS1	Q92903	461 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	OTULIN	Q96BN8	352 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	MS4A4E	Q96PG1	132 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ALKBH3	Q96Q83	286 aa	Predicted RBP	4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	FYTTD1	Q96QD9	318 aa	Known RBP	4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ZNF607	Q96SK3	696 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ASCL2	Q99929	193 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SPAG8	Q99932	426 aa	Predicted RBP	4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ELOVL1	Q9BW60	279 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CHIA	Q9BZP6	476 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	LAT2	Q9GZY6	243 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	HOXD1	Q9GZZ0	328 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	PIGU	Q9H490	435 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	TMEM231	Q9H6L2	316 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	MIEF1	Q9NQG6	463 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	DUSP22	Q9NRW4	184 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	NECAP2	Q9NVZ3	263 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	GRHL1	Q9NZI5	618 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	TMEM181	Q9P2C4	612 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SEC14L4	Q9UDX3	406 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CHRNA9	Q9UGM1	479 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	KCNE5	Q9UJ90	142 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	TRAPPC4	Q9Y296	219 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	INSIG2	Q9Y5U4	225 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CACNG2	Q9Y698	323 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	KCNE3	Q9Y6H6	103 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	COMMD3-BMI1	R4GMX3	469 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	DOCK11	Q5JSL3	2073 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CSMD3	Q7Z407	3707 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	DNAH7	Q8WXX0	4024 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	DSPP	Q9NZW4	1301 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	IGHV1-69-2	A0A0G2JMI3	117 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CENPVL1	A0A0U1RR11	272 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	NOTO	A8MTQ0	251 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	C17orf100	A8MU93	164 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ZNF879	B4DU55	563 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CLDN25	C9JDP6	229 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	NPIPB8	E9PQR5	432 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660		H0YL77	283 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	PGRMC1	O00264	195 aa	Known RBP	4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CTDSPL	O15194	276 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	KRT33A	O76009	404 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	IGHM	P01871	453 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	KRT6A	P02538	564 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	LCAT	P04180	440 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	HMGN2	P05204	90 aa	Known RBP	4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CPA3	P15088	417 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ATP6V1C1	P21283	382 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	PRKACB	P22694	351 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	FKBP2	P26885	142 aa	Known RBP	4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CD80	P33681	288 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	HSD17B3	P37058	310 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	P2RY4	P51582	365 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SST	P61278	116 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	RPS7	P62081	194 aa	Known RBP	4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SLC35A1	P78382	337 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	HSF2	Q03933	536 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	PAX8	Q06710	450 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	DEFB112	Q30KQ8	113 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ALKBH6	Q3KRA9	238 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	DCST2	Q5T1A1	773 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	PDZK1	Q5T2W1	519 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ANKRD26P1	Q6NSI1	321 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	PAQR6	Q6TCH4	344 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	DLEU7	Q6UYE1	221 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	NHLRC1	Q6VVB1	395 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660		Q6YL49	198 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	C3orf62	Q6ZUJ4	267 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CCDC80	Q76M96	950 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ZNF771	Q7L3S4	317 aa	Predicted RBP	4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	RNF144B	Q7Z419	303 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ZDHHC21	Q8IVQ6	265 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CTAGE3P	Q8IX95	158 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	PARP8	Q8N3A8	854 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	RNF148	Q8N7C7	305 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	TMEM99	Q8N816	258 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ZNF614	Q8N883	585 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	OR52E2	Q8NGJ4	325 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CDC26	Q8NHZ8	85 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	RNASE8	Q8TDE3	154 aa	Known RBP	4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	C17orf50	Q8WW18	174 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	TMEM234	Q8WY98	164 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	NSMAF	Q92636	917 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	FCGR1B	Q92637	280 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	RAB1C	Q92928	201 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CIDEC	Q96AQ7	238 aa	Predicted RBP	4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	PBK	Q96KB5	322 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	EGLN2	Q96KS0	407 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	C20orf173	Q96LM9	149 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ZNF75A	Q96N20	296 aa		4.05	□□□□□ -1.76
NPIPB4-219	ENST00000543660	STAC	Q99469	402 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms