RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 RPS7P62081 194 aaKnown RBP12.18□□□□□ -0.46
DDX11-221ENST00000542661 PPP1CBP62140 327 aa12.18□□□□□ -0.46
DDX11-221ENST00000542661 KLHL12Q53G59 568 aa12.18□□□□□ -0.46
DDX11-221ENST00000542661 LCN1P1Q5VSP4 162 aa12.18□□□□□ -0.46
DDX11-221ENST00000542661 TMEM154Q6P9G4 183 aa12.18□□□□□ -0.46
DDX11-221ENST00000542661 SHFQ7M4L6 423 aa12.18□□□□□ -0.46
DDX11-221ENST00000542661 DCXRQ7Z4W1 244 aa12.18□□□□□ -0.46
DDX11-221ENST00000542661 ERI1Q8IV48 349 aaKnown RBP12.18□□□□□ -0.46
DDX11-221ENST00000542661 OR5L1Q8NGL2 311 aa12.18□□□□□ -0.46
DDX11-221ENST00000542661 SPTSSAQ969W0 71 aa12.18□□□□□ -0.46
DDX11-221ENST00000542661 APOBEC3DQ96AK3 386 aaPredicted RBP12.18□□□□□ -0.46
DDX11-221ENST00000542661 EME1Q96AY2 570 aa12.18□□□□□ -0.46
DDX11-221ENST00000542661 VRK1Q99986 396 aaPredicted RBP12.18□□□□□ -0.46
DDX11-221ENST00000542661 SYT3Q9BQG1 590 aa12.18□□□□□ -0.46
DDX11-221ENST00000542661 MS4A5Q9H3V2 200 aa12.18□□□□□ -0.46
DDX11-221ENST00000542661 DDX28Q9NUL7 540 aaKnown RBP12.18□□□□□ -0.46
DDX11-221ENST00000542661 FZR1Q9UM11 496 aa12.18□□□□□ -0.46
DDX11-221ENST00000542661 MTORP42345 2549 aa12.18□□□□□ -0.46
DDX11-221ENST00000542661 IGLV3-9A0A075B6K5 115 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 TLX2O43763 284 aaPredicted RBP12.17□□□□□ -0.46
DDX11-221ENST00000542661 PRKYO43930 277 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 F12P00748 615 aaPredicted RBP12.17□□□□□ -0.46
DDX11-221ENST00000542661 NGFP01138 241 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 IGHV3-13P01766 116 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 SLC2A5P22732 501 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 NUDT6P53370 316 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 TPTEP56180 551 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 DSCR9P59020 149 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 CDC42P60953 191 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 APOFQ13790 326 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 NKPD1Q17RQ9 610 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 MSMPQ1L6U9 139 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 KRTAP27-1Q3LI81 207 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 MBNL2Q5VZF2 373 aaKnown RBP12.17□□□□□ -0.46
DDX11-221ENST00000542661 LYPD4Q6UWN0 246 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 ZBTB49Q6ZSB9 765 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 RFPL4BQ6ZWI9 263 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 RHOUQ7L0Q8 258 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 KRTAP1-3Q8IUG1 177 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 TIGD4Q8IY51 512 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 ZNF454Q8N9F8 522 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 WFDC11Q8NEX6 87 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 OR6N2Q8NGY6 317 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 TMEM163Q8TC26 289 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 KLF14Q8TD94 323 aaPredicted RBP12.17□□□□□ -0.46
DDX11-221ENST00000542661 SNX33Q8WV41 574 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 SLC7A6Q92536 515 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 ZMYND19Q96E35 227 aaPredicted RBP12.17□□□□□ -0.46
DDX11-221ENST00000542661 MARS2Q96GW9 593 aaKnown RBP12.17□□□□□ -0.46
DDX11-221ENST00000542661 MAP6Q96JE9 813 aa12.17□□□□□ -0.46
DDX11-221ENST00000542661 PNRC2Q9NPJ4 139 aaKnown RBP12.17□□□□□ -0.46
DDX11-221ENST00000542661 H2AFY2Q9P0M6 372 aaPredicted RBP12.17□□□□□ -0.46
DDX11-221ENST00000542661 NDUFS7O75251 213 aa12.16□□□□□ -0.46
DDX11-221ENST00000542661 ADRA2AP08913 450 aa12.16□□□□□ -0.46
DDX11-221ENST00000542661 DBHP09172 617 aa12.16□□□□□ -0.46
DDX11-221ENST00000542661 LIPAP38571 399 aa12.16□□□□□ -0.46
DDX11-221ENST00000542661 RPS27P42677 84 aaKnown RBP12.16□□□□□ -0.46
DDX11-221ENST00000542661 SLC15A1P46059 708 aa12.16□□□□□ -0.46
DDX11-221ENST00000542661 ERVS71-1P61550 626 aa12.16□□□□□ -0.46
DDX11-221ENST00000542661 EFNB1P98172 346 aa12.16□□□□□ -0.46
DDX11-221ENST00000542661 EIF2B1Q14232 305 aaKnown RBP12.16□□□□□ -0.46
DDX11-221ENST00000542661 TAF13Q15543 124 aa12.16□□□□□ -0.46
DDX11-221ENST00000542661 SPATA46Q5T0L3 261 aa12.16□□□□□ -0.46
DDX11-221ENST00000542661 DPY19L4Q7Z388 723 aa12.16□□□□□ -0.46
DDX11-221ENST00000542661 LRP11Q86VZ4 500 aa12.16□□□□□ -0.46
DDX11-221ENST00000542661 GID4Q8IVV7 300 aa12.16□□□□□ -0.46
DDX11-221ENST00000542661 TCEANCQ8N8B7 351 aa12.16□□□□□ -0.46
DDX11-221ENST00000542661 BBS1Q8NFJ9 593 aa12.16□□□□□ -0.46
DDX11-221ENST00000542661 SLC25A40Q8TBP6 338 aa12.16□□□□□ -0.46
DDX11-221ENST00000542661 TRUB1Q8WWH5 349 aaKnown RBP12.16□□□□□ -0.46
DDX11-221ENST00000542661 NEU4Q8WWR8 484 aaPredicted RBP12.16□□□□□ -0.46
DDX11-221ENST00000542661 SLAMF6Q96DU3 332 aa12.16□□□□□ -0.46
DDX11-221ENST00000542661 TEAD3Q99594 435 aa12.16□□□□□ -0.46
DDX11-221ENST00000542661 OR2J1Q9GZK6 312 aa12.16□□□□□ -0.46
DDX11-221ENST00000542661 TAAR3PQ9P1P4 343 aa12.16□□□□□ -0.46
DDX11-221ENST00000542661 CGGBP1Q9UFW8 167 aaPredicted RBP12.16□□□□□ -0.46
DDX11-221ENST00000542661 ZANQ9Y493 2812 aa12.16□□□□□ -0.46
DDX11-221ENST00000542661 SLC22A31A6NKX4 558 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 ZNF878C9JN71 531 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 ANKRD65E5RJM6 399 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 F5H5K5 113 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 SSX4O60224 188 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 CLPTM1O96005 669 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 APOC1P02654 83 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 CSF3P09919 207 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 ACSM4P0C7M7 580 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 POLR2IP36954 125 aaKnown RBP12.15□□□□□ -0.46
DDX11-221ENST00000542661 GRB2P62993 217 aaKnown RBP12.15□□□□□ -0.46
DDX11-221ENST00000542661 CLEC12BQ2HXU8 276 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 RSPO1Q2MKA7 263 aaPredicted RBP12.15□□□□□ -0.46
DDX11-221ENST00000542661 AADACL4Q5VUY2 407 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 NXNL2Q5VZ03 156 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 CLEC2AQ6UVW9 174 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 DRAM2Q6UX65 266 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 MEPCEQ7L2J0 689 aaKnown RBP12.15□□□□□ -0.46
DDX11-221ENST00000542661 OR10S1Q8NGN2 331 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 OR8J1Q8NGP2 316 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 OTOSQ8NHW6 89 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 ST7LQ8TDW4 575 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 HRASLS5Q96KN8 279 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms