RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 C8orf74Q6P047 294 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 TMIGD1Q6UXZ0 262 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 NCCRP1Q6ZVX7 275 aaPredicted RBP3.2□□□□□ -1.9
SNHG1-217ENST00000541578 ZNF546Q86UE3 836 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 RDH10Q8IZV5 341 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 TTC29Q8NA56 475 aaPredicted RBP3.2□□□□□ -1.9
SNHG1-217ENST00000541578 OR10H4Q8NGA5 316 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 OR8K1Q8NGG5 319 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 FANK1Q8TC84 345 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 NRGNQ92686 78 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 SMARCD2Q92925 531 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 KIAA1143Q96AT1 154 aaPredicted RBP3.2□□□□□ -1.9
SNHG1-217ENST00000541578 C8orf44Q96CB5 159 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 ECHDC3Q96DC8 303 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 SLC25A38Q96DW6 304 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 SNF8Q96H20 258 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 XPO6Q96QU8 1125 aaKnown RBP3.2□□□□□ -1.9
SNHG1-217ENST00000541578 TAAR1Q96RJ0 339 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 RHOXF2Q9BQY4 288 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 SIKE1Q9BRV8 207 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 IL22Q9GZX6 179 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 STMN4Q9H169 189 aaPredicted RBP3.2□□□□□ -1.9
SNHG1-217ENST00000541578 RNF167Q9H6Y7 350 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 CYP3A43Q9HB55 503 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 IL26Q9NPH9 171 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 ZC4H2Q9NQZ6 224 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 RGS18Q9NS28 235 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 EXD2Q9NVH0 621 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 GPATCH2LQ9NWQ4 482 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 IFNKQ9P0W0 207 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 LSM7Q9UK45 103 aaKnown RBP3.2□□□□□ -1.9
SNHG1-217ENST00000541578 KLK13Q9UKR3 277 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 STK38LQ9Y2H1 464 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 GOLT1BQ9Y3E0 138 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 DSPP15924 2871 aaKnown RBP3.2□□□□□ -1.9
SNHG1-217ENST00000541578 USP24Q9UPU5 2620 aa3.2□□□□□ -1.9
SNHG1-217ENST00000541578 TP53BP1Q12888 1972 aaPredicted RBP3.2□□□□□ -1.9
SNHG1-217ENST00000541578 PATJQ8NI35 1801 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 IGHV3-35A0A0C4DH35 117 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 M0R3G1 203 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 TRDMT1O14717 391 aaKnown RBP3.19□□□□□ -1.9
SNHG1-217ENST00000541578 LIN7AO14910 233 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-217ENST00000541578 AGPAT2O15120 278 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 CETN3O15182 167 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 YKT6O15498 198 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 SPOPO43791 374 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 CLIC3O95833 236 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 DCNP07585 359 aaKnown RBP3.19□□□□□ -1.9
SNHG1-217ENST00000541578 CT62P0C5K7 136 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 ZNF286BP0CG31 522 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 HPGDP15428 266 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 ZNF43P17038 809 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 NPR2P20594 1047 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 BCKDHBP21953 392 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 S100A1P23297 94 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 CXCR2P25025 360 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 DCKP27707 260 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 MDH2P40926 338 aaKnown RBP3.19□□□□□ -1.9
SNHG1-217ENST00000541578 NSG1P42857 185 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 KIR2DS4P43632 304 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 VDAC2P45880 294 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-217ENST00000541578 CDKN1BP46527 198 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 NOVP48745 357 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 KLK7P49862 253 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 ETV1P50549 477 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 CLDN8P56748 225 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 B2MP61769 119 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 ADARB1P78563 741 aaKnown RBP3.19□□□□□ -1.9
SNHG1-217ENST00000541578 MAB21L1Q13394 359 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 ATP6AP1Q15904 470 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 HSDL1Q3SXM5 330 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 CCDC153Q494R4 210 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 KLF17Q5JT82 389 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-217ENST00000541578 ATAD3CQ5T2N8 411 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 N4BP2L1Q5TBK1 243 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-217ENST00000541578 RNLSQ5VYX0 342 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 TMEM220Q6QAJ8 160 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 SLC25A48Q6ZT89 311 aaKnown RBP3.19□□□□□ -1.9
SNHG1-217ENST00000541578 TMEM179BQ7Z7N9 219 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 P2RY8Q86VZ1 359 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 SPATA24Q86W54 205 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 IQCKQ8N0W5 287 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 PDIK1LQ8N165 341 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 JAGN1Q8N5M9 183 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 MS4A15Q8N5U1 240 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 OR2AP1Q8NGE2 309 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 OR5T3Q8NGG3 340 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 OR5B3Q8NH48 314 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 ZNF502Q8TBZ5 544 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 DNAJB3Q8WWF6 145 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 MARC2Q969Z3 335 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 JSRP1Q96MG2 331 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-217ENST00000541578 NICN1Q9BSH3 213 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 RNF126Q9BV68 326 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 XKR8Q9H6D3 395 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 RANBP3Q9H6Z4 567 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-217ENST00000541578 UGT1A10Q9HAW8 530 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 MRPS30Q9NP92 439 aaKnown RBP3.19□□□□□ -1.9
SNHG1-217ENST00000541578 RPS10P5Q9NQ39 176 aa3.19□□□□□ -1.9
SNHG1-217ENST00000541578 DYRK4Q9NR20 520 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms