RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 ZNF684Q5T5D7 378 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 OR2G6Q5TZ20 316 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 TMEM53Q6P2H8 277 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 SEZ6L2Q6UXD5 910 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 PRSS48Q7RTY5 328 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 SPARTQ8N0X7 666 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 C17orf78Q8N4C9 275 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 NANOGP1Q8N7R0 232 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 LINC01560Q8TB33 94 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 RNF133Q8WVZ7 376 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 ZC3HAV1LQ96H79 300 aaKnown RBP8.12□□□□□ -1.11
DDX55-208ENST00000541259 OR8B4Q96RC9 309 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 MNTQ99583 582 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 CDCA4Q9BXL8 241 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 ELOVL3Q9HB03 270 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 INPP5EQ9NRR6 644 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 PLEK2Q9NYT0 353 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 NPAP1Q9NZP6 1156 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 FBXL3Q9UKT7 428 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 AMDHD2Q9Y303 409 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 TMEM14AQ9Y6G1 99 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 ROS1P08922 2347 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 PLCE1Q9P212 2302 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 LOC100509620A0A075B734 347 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 OR6C6A6NF89 314 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 METTL15A6NJ78 407 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 J3QLW9 94 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 PHYHO14832 338 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 RPP14O95059 124 aaKnown RBP8.11□□□□□ -1.11
DDX55-208ENST00000541259 ABHD16AO95870 558 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 LALBAP00709 142 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 PTHP01270 115 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 SMIM18P0DKX4 95 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 CCL2P13500 99 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 CBR1P16152 277 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 ZNF14P17017 642 aaPredicted RBP8.11□□□□□ -1.11
DDX55-208ENST00000541259 ZNF19P17023 458 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 MYL12AP19105 171 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 PCMT1P22061 227 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 ANOS1P23352 680 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 HOXC12P31275 282 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 PSMB10P40306 273 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 OPRL1P41146 370 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 HTR5AP47898 357 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 ZNF83P51522 516 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 IDH3GP51553 393 aaPredicted RBP8.11□□□□□ -1.11
DDX55-208ENST00000541259 ACTC1P68032 377 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 ACTA1P68133 377 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 EMX1Q04741 257 aaPredicted RBP8.11□□□□□ -1.11
DDX55-208ENST00000541259 HGFACQ04756 655 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 PPA1Q15181 289 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 RAB35Q15286 201 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 CDONQ4KMG0 1287 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 RNLSQ5VYX0 342 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 ZNF773Q6PK81 442 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 KRT77Q7Z794 578 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 NAA40Q86UY6 237 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 P2RY8Q86VZ1 359 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 CCDC36Q8IYA8 594 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 ZNF679Q8IYX0 411 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 YIPF7Q8N8F6 280 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 ZNF485Q8NCK3 441 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 TSPAN14Q8NG11 270 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 OR1F12Q8NHA8 337 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 SNX33Q8WV41 574 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 SPRYD4Q8WW59 207 aaPredicted RBP8.11□□□□□ -1.11
DDX55-208ENST00000541259 GATAD2BQ8WXI9 593 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 ASB17Q8WXJ9 295 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 HSD17B8Q92506 261 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 MUCL1Q96DR8 90 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 C4orf36Q96KX1 117 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 DMRTB1Q96MA1 342 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 OR5M11Q96RB7 305 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 ATF6BQ99941 703 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 WACQ9BTA9 647 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 GSX2Q9BZM3 304 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 OR10A4Q9H209 315 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 CHCHD3Q9NX63 227 aaKnown RBP8.11□□□□□ -1.11
DDX55-208ENST00000541259 GNG8Q9UK08 70 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 IKZF2Q9UKS7 526 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 LSM2Q9Y333 95 aaKnown RBP8.11□□□□□ -1.11
DDX55-208ENST00000541259 GRIP1Q9Y3R0 1128 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 LRP12Q9Y561 859 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 ANKHD1Q8IWZ3 2542 aaKnown RBP8.11□□□□□ -1.11
DDX55-208ENST00000541259 UTP20O75691 2785 aaKnown RBP8.11□□□□□ -1.11
DDX55-208ENST00000541259 TENM4Q6N022 2769 aa8.11□□□□□ -1.11
DDX55-208ENST00000541259 HELZ2Q9BYK8 2649 aaKnown RBP8.11□□□□□ -1.11
DDX55-208ENST00000541259 ABCA4P78363 2273 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 PKDREJQ9NTG1 2253 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 A0A087WXM4 84 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 IGHV1-18A0A0C4DH31 117 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 CLEC18AA5D8T8 446 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 C5orf63A6NC05 138 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 MAGEA13PA6NCF6 341 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 ZNF878C9JN71 531 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 E9PI62 339 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 PNPP00491 289 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 IGKV3-15P01624 115 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 SERPINA5P05154 406 aa8.1□□□□□ -1.11
DDX55-208ENST00000541259 LCKP06239 509 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms