RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 HIST2H3PS2Q5TEC6 136 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 MBNL2Q5VZF2 373 aaKnown RBP7.9□□□□□ -1.14
SNHG1-215ENST00000540904 PLBD1Q6P4A8 553 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 HIST2H3AQ71DI3 136 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 Q71RC1 249 aaPredicted RBP7.9□□□□□ -1.14
SNHG1-215ENST00000540904 BIVMQ86UB2 503 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 C1orf174Q8IYL3 243 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 C10orf105Q8TEF2 133 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 SNX33Q8WV41 574 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 IPCEF1Q8WWN9 437 aaPredicted RBP7.9□□□□□ -1.14
SNHG1-215ENST00000540904 NEU4Q8WWR8 484 aaPredicted RBP7.9□□□□□ -1.14
SNHG1-215ENST00000540904 PTP4A1Q93096 173 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 CENPNQ96H22 339 aaPredicted RBP7.9□□□□□ -1.14
SNHG1-215ENST00000540904 PLEKHA8Q96JA3 519 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 MAP6Q96JE9 813 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 COQ7Q99807 217 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 HINT3Q9NQE9 182 aaKnown RBP7.9□□□□□ -1.14
SNHG1-215ENST00000540904 TBCCD1Q9NVR7 557 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 SLCO1C1Q9NYB5 712 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 TVP23BQ9NYZ1 205 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 ATPIF1Q9UII2 106 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 OAZ3Q9UMX2 235 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 STARD10Q9Y365 291 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 PLSCR5A0PG75 271 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 ZNF593O00488 134 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-215ENST00000540904 TIMM8AO60220 97 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-215ENST00000540904 LY6G6DO95868 133 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 IGHV3-13P01766 116 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 MT-ND5P03915 603 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 PSKH1P11801 424 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 ENTPD1P49961 510 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 PDLIM4P50479 330 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 BLVRAP53004 296 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 CCL8P80075 99 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 ECH1Q13011 328 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 PTGES3Q15185 160 aaKnown RBP7.89□□□□□ -1.15
SNHG1-215ENST00000540904 SNAPC1Q16533 368 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 KLHL12Q53G59 568 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 TMEM255AQ5JRV8 349 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 KDM4DQ6B0I6 523 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 ZFP1Q6P2D0 407 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 CLEC9AQ6UXN8 241 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 DCXRQ7Z4W1 244 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 ERI1Q8IV48 349 aaKnown RBP7.89□□□□□ -1.15
SNHG1-215ENST00000540904 CPOQ8IVL8 374 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 PARP8Q8N3A8 854 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 UBASH3BQ8TF42 649 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 GTF3AQ92664 365 aaKnown RBP7.89□□□□□ -1.15
SNHG1-215ENST00000540904 COG8Q96MW5 612 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 RAB3IPQ96QF0 476 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-215ENST00000540904 DCLRE1CQ96SD1 692 aaKnown RBP7.89□□□□□ -1.15
SNHG1-215ENST00000540904 ATF6BQ99941 703 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 PKP2Q99959 881 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 PIMREGQ9BSJ6 248 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 GABARAPL1Q9H0R8 117 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 POFUT1Q9H488 388 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 SLC25A19Q9HC21 320 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 MYOZ1Q9NP98 299 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-215ENST00000540904 PNRC2Q9NPJ4 139 aaKnown RBP7.89□□□□□ -1.15
SNHG1-215ENST00000540904 CENPMQ9NSP4 180 aa7.89□□□□□ -1.15
SNHG1-215ENST00000540904 MAP1AP78559 2803 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-215ENST00000540904 LOC390937A0A1W2PQ73 354 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 C17orf100A8MU93 164 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 LYNX1G3V0Z9 82 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 H3BNX3 289 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 H3BSA7 217 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 TPD52L2O43399 206 aaKnown RBP7.88□□□□□ -1.15
SNHG1-215ENST00000540904 SPRY3O43610 288 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 GLCEO94923 617 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 HPXP02790 462 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 ACSM4P0C7M7 580 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 LYNX1P0DP58 116 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 SLC25A16P16260 332 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 TUBG1P23258 451 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 IGFBP5P24593 272 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 EPHA2P29317 976 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 GSTT1P30711 240 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 MAGEB1P43366 347 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 SLC6A9P48067 706 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 RGS6P49758 472 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 ZNF81P51508 661 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 RPS7P62081 194 aaKnown RBP7.88□□□□□ -1.15
SNHG1-215ENST00000540904 ESRRGP62508 458 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 PSG7Q13046 419 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 EIF2B1Q14232 305 aaKnown RBP7.88□□□□□ -1.15
SNHG1-215ENST00000540904 RSPO1Q2MKA7 263 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-215ENST00000540904 LINC01590Q5TEZ4 76 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 SPATC1Q76KD6 591 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 CXXC5Q7LFL8 322 aaKnown RBP7.88□□□□□ -1.15
SNHG1-215ENST00000540904 DPY19L4Q7Z388 723 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 NAA40Q86UY6 237 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 C10orf67Q8IYJ2 551 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 BBS1Q8NFJ9 593 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 OR5L1Q8NGL2 311 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 OR10S1Q8NGN2 331 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 OR6N2Q8NGY6 317 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 SPTSSAQ969W0 71 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 APOBEC3DQ96AK3 386 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-215ENST00000540904 CMBLQ96DG6 245 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 ZMYND19Q96E35 227 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms