RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 LHFPL6Q9Y693 200 aa11□□□□□ -0.65
SMAD3-204ENST00000540846 R4GMQ9 66 aa11□□□□□ -0.65
SMAD3-204ENST00000540846 SMG1Q96Q15 3661 aaKnown RBP11□□□□□ -0.65
SMAD3-204ENST00000540846 PDCD5O14737 125 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 CYTIPO60759 359 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 PNPP00491 289 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 EPXP11678 715 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 ATF1P18846 271 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 DCTDP32321 178 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 RIN1Q13671 783 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 PDSS1Q5T2R2 415 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 CORO6Q6QEF8 472 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 GDPD1Q8N9F7 314 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 OR10AC1Q8NH08 325 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 FNDC9Q8TBE3 224 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 ABHD3Q8WU67 409 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 ROBO4Q8WZ75 1007 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 INTS12Q96CB8 462 aaKnown RBP10.99□□□□□ -0.65
SMAD3-204ENST00000540846 SLAMF6Q96DU3 332 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 C1orf198Q9H425 327 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 POLE4Q9NR33 117 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 TBCCD1Q9NVR7 557 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 ABRACLQ9P1F3 81 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 FOXD3Q9UJU5 478 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-204ENST00000540846 FBXL3Q9UKT7 428 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 ZNF835Q9Y2P0 537 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 ZNF175Q9Y473 711 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 RP1L1Q8IWN7 2480 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-204ENST00000540846 hCG_2014768A0A024R1R8 64 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 IGKV3D-15A0A087WSY6 115 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 MAGEB3O15480 346 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 TGM6O95932 706 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 PTTG1O95997 202 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 H2BFMP0C1H6 154 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 SLC2A2P11168 524 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-204ENST00000540846 ELK1P19419 428 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 AZGP1P25311 298 aaKnown RBP10.99□□□□□ -0.65
SMAD3-204ENST00000540846 NTF4P34130 210 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 MAGEB1P43366 347 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 ACSF3Q4G176 576 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-204ENST00000540846 RTL6Q6ICC9 239 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 RHOUQ7L0Q8 258 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 FCRLAQ7L513 359 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 SYT9Q86SS6 491 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 LRRC28Q86X40 367 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-204ENST00000540846 C20orf196Q8IYI0 205 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 OR10S1Q8NGN2 331 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 OR5M9Q8NGP3 310 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 OR6N1Q8NGY5 312 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 FAM57AQ8TBR7 257 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 TRMT10AQ8TBZ6 339 aaKnown RBP10.99□□□□□ -0.65
SMAD3-204ENST00000540846 BBC3Q96PG8 261 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-204ENST00000540846 GFI1Q99684 422 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 SLITRK2Q9H156 845 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 PPP1R3EQ9H7J1 279 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 SP140LQ9H930 580 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 EMC7Q9NPA0 242 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 TIGARQ9NQ88 270 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 CYSLTR2Q9NS75 346 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 GDF2Q9UK05 429 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-204ENST00000540846 SLC22A13Q9Y226 551 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 FLVCR1Q9Y5Y0 555 aa10.99□□□□□ -0.65
SMAD3-204ENST00000540846 FREM1Q5H8C1 2179 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 POLEQ07864 2286 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 TTLL8A6PVC2 850 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 ISG15P05161 165 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 IL7P13232 177 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 CDAP32320 146 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 SOX2P48431 317 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 SELENOPP49908 381 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 MMP16P51512 607 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 DEFA1P59665 94 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 DEFA3P59666 94 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 LSM6P62312 80 aaKnown RBP10.98□□□□□ -0.65
SMAD3-204ENST00000540846 PHYHD1Q5SRE7 291 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 CFAP77Q6ZQR2 320 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 SEM1Q6ZVN7 128 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 LRRTM1Q86UE6 522 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 OR8H2Q8N162 312 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 OR51A4Q8NGJ6 313 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 SETD6Q8TBK2 473 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 TMEM106AQ96A25 262 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 ORAI1Q96D31 301 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 SEC61A2Q9H9S3 476 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 RNF122Q9H9V4 155 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 G6PC2Q9NQR9 355 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 C14orf119Q9NWQ9 140 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 POLR1DQ9Y2S0 133 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 EMC9Q9Y3B6 208 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 AK6Q9Y3D8 172 aaKnown RBP10.98□□□□□ -0.65
SMAD3-204ENST00000540846 FAM215AQ9Y5M1 114 aa10.98□□□□□ -0.65
SMAD3-204ENST00000540846 IFITM5A6NNB3 132 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 AHRRA9YTQ3 701 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 ZNF878C9JN71 531 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 AIPO00170 330 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 EDN3P14138 238 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 NPR2P20594 1047 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 MSR1P21757 451 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 ACHEP22303 614 aa10.97□□□□□ -0.65
SMAD3-204ENST00000540846 PSMA6P60900 246 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms