RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 MED21Q13503 144 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 SGCAQ16586 387 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 ZNF181Q2M3W8 571 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 ZFP1Q6P2D0 407 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 Q6YL49 198 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 ZNF841Q6ZN19 808 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 CCDC80Q76M96 950 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 HIST3H2AQ7L7L0 130 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 ZER1Q7Z7L7 766 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 SYT9Q86SS6 491 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 KLBQ86Z14 1044 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 NKAIN4Q8IVV8 208 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 MUC20Q8N307 709 aaPredicted RBP6.09□□□□□ -1.43
YBX3-209ENST00000540747 DPP10Q8N608 796 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 CLDN22Q8N7P3 220 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 NPEPL1Q8NDH3 523 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 OR2Z1Q8NG97 314 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 OR10S1Q8NGN2 331 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 OR4F5Q8NH21 305 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 VANGL1Q8TAA9 524 aaPredicted RBP6.09□□□□□ -1.43
YBX3-209ENST00000540747 TMEM255BQ8WV15 326 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 PYDC1Q8WXC3 89 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 HIST1H2ACQ93077 130 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 CCDC124Q96CT7 223 aaKnown RBP6.09□□□□□ -1.43
YBX3-209ENST00000540747 HAVCR1Q96D42 359 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 OR2V2Q96R30 315 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 RBM4BQ9BQ04 359 aaKnown RBP6.09□□□□□ -1.43
YBX3-209ENST00000540747 CHIAQ9BZP6 476 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 KCNN2Q9H2S1 579 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 KAT8Q9H7Z6 458 aaKnown RBP6.09□□□□□ -1.43
YBX3-209ENST00000540747 NANOGQ9H9S0 305 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 ELOVL3Q9HB03 270 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 BEX1Q9HBH7 125 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 NOX4Q9NPH5 578 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 POLE4Q9NR33 117 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 PPP1R3CQ9UQK1 317 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 HIF3AQ9Y2N7 669 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 TIMM10BQ9Y5J6 103 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 DOCK11Q5JSL3 2073 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 OR6C6A6NF89 314 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 EVPLLA8MZ36 301 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 C22orf46C9J442 243 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 J3QW42 95 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 M0QZ24 198 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 TNFRSF13BO14836 293 aaPredicted RBP6.08□□□□□ -1.44
YBX3-209ENST00000540747 OR5F1O95221 314 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 ABHD16AO95870 558 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 MELTFP08582 738 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 UMPSP11172 480 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 NR2C1P13056 603 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 MMP9P14780 707 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 GSTM3P21266 225 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 MSR1P21757 451 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 TNFSF4P23510 183 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 PCGF2P35227 344 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 PMELP40967 661 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 ARHGDIAP52565 204 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 BPIFB3P59826 476 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 STX1BP61266 288 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 PSME3P61289 254 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 RPL27P61353 136 aaKnown RBP6.08□□□□□ -1.44
YBX3-209ENST00000540747 PCBD1P61457 104 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 CD47Q08722 323 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 FLOT2Q14254 428 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 LAPTM4AQ15012 233 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 ZNF404Q494X3 552 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 HIST2H2BDQ6DRA6 164 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 FIP1L1Q6UN15 594 aaKnown RBP6.08□□□□□ -1.44
YBX3-209ENST00000540747 BTNL3Q6UXE8 466 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 FBXW12Q6X9E4 464 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 BRD3OSQ6XYD6 125 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 C17orf107Q6ZR85 190 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 PATL1Q86TB9 770 aaKnown RBP6.08□□□□□ -1.44
YBX3-209ENST00000540747 ALDH16A1Q8IZ83 802 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 PGAM4Q8N0Y7 254 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 FAM156AQ8NDB6 213 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 FNDC8Q8TC99 324 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 TMEM239Q8WW34 195 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 NSMAFQ92636 917 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 RCN3Q96D15 328 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 CMBLQ96DG6 245 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 SGTBQ96EQ0 304 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 MEGF10Q96KG7 1140 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 TSC22D3Q99576 134 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 CGREF1Q99674 301 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 TMEM246Q9BRR3 403 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 WACQ9BTA9 647 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 CDADC1Q9BWV3 514 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 POLR2J2Q9GZM3 115 aaKnown RBP6.08□□□□□ -1.44
YBX3-209ENST00000540747 YIPF3Q9GZM5 350 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 FAM192AQ9GZU8 254 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 POLR2J3Q9H1A7 115 aaKnown RBP6.08□□□□□ -1.44
YBX3-209ENST00000540747 MARCH7Q9H992 704 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 ADA2Q9NZK5 511 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 CCDC167Q9P0B6 97 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.08□□□□□ -1.44
YBX3-209ENST00000540747 NDRG4Q9ULP0 352 aaKnown RBP6.08□□□□□ -1.44
YBX3-209ENST00000540747 STARD10Q9Y365 291 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 POMT1Q9Y6A1 747 aa6.08□□□□□ -1.44
YBX3-209ENST00000540747 DNAH9Q9NYC9 4486 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms