RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 FGF20Q9NP95 211 aaPredicted RBP1.51□□□□□ -2.17
MDM2-227ENST00000540709 RHBDL2Q9NX52 303 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 LGALS13Q9UHV8 139 aa1.51□□□□□ -2.17
MDM2-227ENST00000540709 AKNAQ7Z591 1439 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 PALLDQ8WX93 1383 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 ITGB4P16144 1822 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 SDK2Q58EX2 2172 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 TMEM120BA0PK00 339 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 VGLL3A8MV65 326 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 BTNL10A8MVZ5 291 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 L7N2F9 121 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 CPLX1O14810 134 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 H6PDO95479 791 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 SERPINA5P05154 406 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 GGT1P19440 569 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 NSG1P42857 185 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 TMED10P49755 219 aaKnown RBP1.5□□□□□ -2.17
MDM2-227ENST00000540709 RND2P52198 227 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 RPS11P62280 158 aaKnown RBP eCLIP1.5□□□□□ -2.17
MDM2-227ENST00000540709 RCAN2Q14206 197 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 TMEM107Q6UX40 140 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 NANOGNBQ7Z5D8 188 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 MRPL55Q7Z7F7 128 aaKnown RBP1.5□□□□□ -2.17
MDM2-227ENST00000540709 SPANXA2-OT1Q8N9U9 137 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 FBXL13Q8NEE6 735 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 C1orf64Q8NEQ6 169 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 OR11H7Q8NGC8 314 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 OR8J1Q8NGP2 316 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 OR10G6Q8NH81 332 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 RAB3IL1Q8TBN0 382 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 ZCCHC13Q8WW36 166 aaKnown RBP1.5□□□□□ -2.17
MDM2-227ENST00000540709 PKIBQ9C010 78 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 LHX5Q9H2C1 402 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 TMEM9BQ9NQ34 198 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 C8orf17Q9NRJ1 99 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 HRASLS2Q9NWW9 162 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 TSSC4Q9Y5U2 329 aaPredicted RBP1.5□□□□□ -2.17
MDM2-227ENST00000540709 CAMTA1Q9Y6Y1 1673 aa1.5□□□□□ -2.17
MDM2-227ENST00000540709 C5orf63A6NC05 138 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 FAM47DPA6NHR8 397 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 ZNF878C9JN71 531 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 MANBAO00462 879 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 RAB29O14966 203 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 FKBP6O75344 327 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 IGHV3-11P01762 117 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 ZNF43P17038 809 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 RBM34P42696 430 aaKnown RBP1.49□□□□□ -2.17
MDM2-227ENST00000540709 GDI2P50395 445 aaKnown RBP1.49□□□□□ -2.17
MDM2-227ENST00000540709 ACLYP53396 1101 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 TGM3Q08188 693 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 PGGHGQ32M88 737 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 KRTAP6-3Q3LI67 103 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 RNASE13Q5GAN3 156 aaKnown RBP1.49□□□□□ -2.17
MDM2-227ENST00000540709 GPR107Q5VW38 600 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 RNASEKQ6P5S7 137 aaKnown RBP1.49□□□□□ -2.17
MDM2-227ENST00000540709 NIPA1Q7RTP0 329 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 NKAIN4Q8IVV8 208 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 CBR4Q8N4T8 237 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 CSGALNACT2Q8N6G5 542 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 OR9K2Q8NGE7 335 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 OR5B3Q8NH48 314 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 KLF14Q8TD94 323 aaPredicted RBP1.49□□□□□ -2.17
MDM2-227ENST00000540709 IP6K3Q96PC2 410 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 RBBP8Q99708 897 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 C21orf62Q9NYP8 219 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 COX16Q9P0S2 106 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 DHCR7Q9UBM7 475 aaKnown RBP1.49□□□□□ -2.17
MDM2-227ENST00000540709 EXTL2Q9UBQ6 330 aa1.49□□□□□ -2.17
MDM2-227ENST00000540709 IGHV3-49A0A0A0MS15 119 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 IGLV1-36A0A0B4J1U3 117 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 OR6C70A6NIJ9 312 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 PLIN3O60664 434 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 CST1P01037 141 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 GLAP06280 429 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 EIF4EP06730 217 aaKnown RBP1.48□□□□□ -2.17
MDM2-227ENST00000540709 ACSM4P0C7M7 580 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 TROVE2P10155 538 aaKnown RBP eCLIP1.48□□□□□ -2.17
MDM2-227ENST00000540709 CD37P11049 281 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 EIF2S2P20042 333 aaKnown RBP1.48□□□□□ -2.17
MDM2-227ENST00000540709 U2AF2P26368 475 aaKnown RBP eCLIP1.48□□□□□ -2.17
MDM2-227ENST00000540709 TALDO1P37837 337 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 SLC1A1P43005 524 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 PRLHRP49683 370 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 CCNG1P51959 295 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 PRMT2P55345 433 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 ATP5IP56385 69 aaPredicted RBP1.48□□□□□ -2.17
MDM2-227ENST00000540709 PPIDQ08752 370 aaKnown RBP1.48□□□□□ -2.17
MDM2-227ENST00000540709 BST1Q10588 318 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 TEX30Q5JUR7 227 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 PRELID2Q8N945 189 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 OR56B2PQ8NGI1 322 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 OR5M1Q8NGP8 315 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 EEF1AKMT3Q96AZ1 226 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 ZNF317Q96PQ6 595 aaPredicted RBP1.48□□□□□ -2.17
MDM2-227ENST00000540709 SLC29A1Q99808 456 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 CHCHD7Q9BUK0 85 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 NEK6Q9HC98 313 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 MED4Q9NPJ6 270 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 NLRC5Q86WI3 1866 aa1.48□□□□□ -2.17
MDM2-227ENST00000540709 IGHV1-3A0A0C4DH29 117 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms