RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 SIAH3Q8IW03 269 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 PLPP7Q8NBV4 271 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 SLC39A7Q92504 469 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 CREB3L1Q96BA8 519 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 SIGLEC12Q96PQ1 595 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 C7orf50Q9BRJ6 194 aaKnown RBP13.15□□□□□ -0.3
TSFM-207ENST00000540550 ZNF416Q9BWM5 594 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 RBM24Q9BX46 236 aaKnown RBP13.15□□□□□ -0.3
TSFM-207ENST00000540550 ULBP2Q9BZM5 246 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 NELFAQ9H3P2 528 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 NUFIP1Q9UHK0 495 aaKnown RBP13.15□□□□□ -0.3
TSFM-207ENST00000540550 HMX3A6NHT5 357 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 GABARAPH6UMI1 98 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 LINC01387J3KSC0 135 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 RER1O15258 196 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 DHHO43323 396 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 LRP3O75074 770 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 TRAPPC2P0DI81 140 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 TRAPPC2BP0DI82 140 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 CDK2P24941 298 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 SLC6A1P30531 599 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 POU3F4P49335 361 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 SUCLG1P53597 346 aaKnown RBP13.15□□□□□ -0.3
TSFM-207ENST00000540550 PHYHD1Q5SRE7 291 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 STPG1Q5TH74 334 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 ASPHD2Q6ICH7 369 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 C20orf196Q8IYI0 205 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 OR51D1Q8NGF3 324 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 OR10D3Q8NH80 312 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 C17orf50Q8WW18 174 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 FCAMRQ8WWV6 532 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 FAM3DQ96BQ1 224 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 DPAGT1Q9H3H5 408 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 AUNIPQ9H7T9 357 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 N6AMT1Q9Y5N5 214 aa13.15□□□□□ -0.3
TSFM-207ENST00000540550 LOC100289279A0A1B0GTE1 492 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 KRT33AO76009 404 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 ITGA5P08648 1049 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 FTH1P19P0C7X4 201 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 CD82P27701 267 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 HTR2CP28335 458 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 GDNFP39905 211 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 MNDAP41218 407 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 CX3CR1P49238 355 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 PRKXP51817 358 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 TAS2R20P59543 309 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 TATDN3Q17R31 274 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 MTFR2Q6P444 385 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 FOXL2NBQ6ZUU3 175 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 COMMD2Q86X83 199 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 ZNF283Q8N7M2 679 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 NKAIN3Q8N8D7 197 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 ZIC4Q8N9L1 334 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 PHF21AQ96BD5 680 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 UPRTQ96BW1 309 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 MARVELD1Q9BSK0 173 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 PLEKHA1Q9HB21 404 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 ZNF275Q9NSD4 429 aaPredicted RBP13.14□□□□□ -0.31
TSFM-207ENST00000540550 ZNF221Q9UK13 617 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 RCE1Q9Y256 329 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 KNTC1P50748 2209 aa13.14□□□□□ -0.31
TSFM-207ENST00000540550 SPAARA0A1B0GVQ0 90 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 INMT-MINDY4F8WBC2 141 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 TPPPO94811 219 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 ECDO95905 644 aaPredicted RBP13.13□□□□□ -0.31
TSFM-207ENST00000540550 CSRP1P21291 193 aaKnown RBP13.13□□□□□ -0.31
TSFM-207ENST00000540550 GNALP38405 381 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 PTH2RP49190 550 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 AP3S2P59780 193 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 SPOCK1Q08629 439 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 JAGN1Q8N5M9 183 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 OR6M1Q8NGM8 313 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 ROBO4Q8WZ75 1007 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 FGGYQ96C11 551 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 ADGRG7Q96K78 797 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 ZNF703Q9H7S9 590 aaPredicted RBP13.13□□□□□ -0.31
TSFM-207ENST00000540550 PNRC2Q9NPJ4 139 aaKnown RBP13.13□□□□□ -0.31
TSFM-207ENST00000540550 DIABLOQ9NR28 239 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 DDX28Q9NUL7 540 aaKnown RBP13.13□□□□□ -0.31
TSFM-207ENST00000540550 PLA2G3Q9NZ20 509 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 FOXD3Q9UJU5 478 aaPredicted RBP13.13□□□□□ -0.31
TSFM-207ENST00000540550 FLVCR1Q9Y5Y0 555 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 ALG5Q9Y673 324 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 AHCTF1Q8WYP5 2266 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 OTOGLQ3ZCN5 2332 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 A0A0B4J293 547 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 LMX1BO60663 402 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 ZNF20P17024 532 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 HLA-DMAP28067 261 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 DDOSTP39656 456 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 RFC3P40938 356 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 GFRA1P56159 465 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 ZNF121P58317 390 aaPredicted RBP13.13□□□□□ -0.31
TSFM-207ENST00000540550 PLGLB1Q02325 96 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 DYRK1AQ13627 763 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 KLF9Q13886 244 aaPredicted RBP13.13□□□□□ -0.31
TSFM-207ENST00000540550 C2orf76Q3KRA6 126 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 PLA1AQ53H76 456 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 ABLIM2Q6H8Q1 611 aa13.13□□□□□ -0.31
TSFM-207ENST00000540550 AAED1Q7RTV5 226 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms