RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 TMCO2Q7Z6W1 182 aaPredicted RBP8.53□□□□□ -1.04
CLIP1-214ENST00000540539 NRSN1Q8IZ57 195 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 APCDD1Q8J025 514 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 RNF175Q8N4F7 328 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 METTL27Q8N6F8 245 aaPredicted RBP8.53□□□□□ -1.04
CLIP1-214ENST00000540539 AGBL5Q8NDL9 886 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 OR4D11Q8NGI4 311 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 DVL3Q92997 716 aaPredicted RBP8.53□□□□□ -1.04
CLIP1-214ENST00000540539 HAVCR1Q96D42 359 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 RAB39BQ96DA2 213 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 DPH1Q9BZG8 443 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 SEMA4GQ9NTN9 838 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 FCF1Q9Y324 198 aaKnown RBP8.53□□□□□ -1.04
CLIP1-214ENST00000540539 CLDN16Q9Y5I7 305 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 MRPS18BQ9Y676 258 aaKnown RBP8.53□□□□□ -1.04
CLIP1-214ENST00000540539 A0A087WWC5 75 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 IFITM5A6NNB3 132 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 PIRO00625 290 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 GPR39O43194 453 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 ZNF354AO60765 605 aaPredicted RBP8.52□□□□□ -1.05
CLIP1-214ENST00000540539 IFNA21P01568 189 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 CD3DP04234 171 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 AKAIN1P0CW23 69 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 PSG6Q00889 435 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 RPS26P11Q5JNZ5 115 aaPredicted RBP8.52□□□□□ -1.05
CLIP1-214ENST00000540539 ADCK2Q7Z695 626 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 FAM216AQ8WUB2 273 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 ZBTB8AQ96BR9 441 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 FAM71F1Q96KD3 344 aaPredicted RBP8.52□□□□□ -1.05
CLIP1-214ENST00000540539 SAMD8Q96LT4 415 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 TMEM56Q96MV1 263 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 PAAF1Q9BRP4 392 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 SLC35A5Q9BS91 424 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 WWTR1Q9GZV5 400 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 FAM124BQ9H5Z6 455 aaPredicted RBP8.52□□□□□ -1.05
CLIP1-214ENST00000540539 TAF9BQ9HBM6 251 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 OSER1Q9NX31 292 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 CXXC1Q9P0U4 656 aaPredicted RBP8.52□□□□□ -1.05
CLIP1-214ENST00000540539 ICKQ9UPZ9 632 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 ANGPT4Q9Y264 503 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 SLC5A6Q9Y289 635 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 TMEM56-RWDD3S4R434 201 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 TNRC18O15417 2968 aaPredicted RBP8.52□□□□□ -1.05
CLIP1-214ENST00000540539 ZC3H12DA2A288 527 aaKnown RBP8.52□□□□□ -1.05
CLIP1-214ENST00000540539 MEIS3P1A6NDR6 274 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 UNC119BA6NIH7 251 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 SLC22A31A6NKX4 558 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 C3orf80F5H4A9 247 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 H0YIZ8 118 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 IFNL4K9M1U5 179 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 SRPX2O60687 465 aaPredicted RBP8.52□□□□□ -1.05
CLIP1-214ENST00000540539 GLSO94925 669 aaPredicted RBP8.52□□□□□ -1.05
CLIP1-214ENST00000540539 SLC16A8O95907 504 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 TOMM40O96008 361 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 OR5H8P0DN80 308 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 EPORP19235 508 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 CHATP28329 748 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 GABRA4P48169 554 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 TMEM33P57088 247 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 CEBPEQ15744 281 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 KRTCAP3Q53RY4 240 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 OCIAD2Q56VL3 154 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 ZNF311Q5JNZ3 666 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 SOHLH1Q5JUK2 328 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 LDLRAD2Q5SZI1 272 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 CPTPQ5TA50 214 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 AGBL4Q5VU57 503 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 YOD1Q5VVQ6 348 aaPredicted RBP8.52□□□□□ -1.05
CLIP1-214ENST00000540539 RPL7L1Q6DKI1 246 aaKnown RBP8.52□□□□□ -1.05
CLIP1-214ENST00000540539 DMKNQ6E0U4 476 aaPredicted RBP8.52□□□□□ -1.05
CLIP1-214ENST00000540539 B3GALNT2Q8NCR0 500 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 OR8S1Q8NH09 359 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 ABHD3Q8WU67 409 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 MYADMQ96S97 322 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 PHB2Q99623 299 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 SGPP1Q9BX95 441 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 C1QTNF2Q9BXJ5 285 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 CXorf36Q9H7Y0 433 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 SYNPO2LQ9H987 977 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 OR5V1Q9UGF6 321 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 STEAP1Q9UHE8 339 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 VAX2Q9UIW0 290 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 SLC25A13Q9UJS0 675 aa8.52□□□□□ -1.05
CLIP1-214ENST00000540539 MRPS2Q9Y399 296 aaKnown RBP8.52□□□□□ -1.05
CLIP1-214ENST00000540539 DAPL1A0PJW8 107 aa8.51□□□□□ -1.05
CLIP1-214ENST00000540539 ANKUB1A6NFN9 424 aa8.51□□□□□ -1.05
CLIP1-214ENST00000540539 F6UZH7 168 aa8.51□□□□□ -1.05
CLIP1-214ENST00000540539 K7EPK0 472 aa8.51□□□□□ -1.05
CLIP1-214ENST00000540539 NME2P1O60361 137 aa8.51□□□□□ -1.05
CLIP1-214ENST00000540539 FCMRO60667 390 aa8.51□□□□□ -1.05
CLIP1-214ENST00000540539 ARL6IP5O75915 188 aa8.51□□□□□ -1.05
CLIP1-214ENST00000540539 SLC2A10O95528 541 aa8.51□□□□□ -1.05
CLIP1-214ENST00000540539 TBX18O95935 607 aa8.51□□□□□ -1.05
CLIP1-214ENST00000540539 SCGB1D1O95968 90 aa8.51□□□□□ -1.05
CLIP1-214ENST00000540539 RAB40ALP0C0E4 278 aa8.51□□□□□ -1.05
CLIP1-214ENST00000540539 ARAFP10398 606 aa8.51□□□□□ -1.05
CLIP1-214ENST00000540539 FCARP24071 287 aa8.51□□□□□ -1.05
CLIP1-214ENST00000540539 PNPLA4P41247 253 aa8.51□□□□□ -1.05
CLIP1-214ENST00000540539 UCP2P55851 309 aa8.51□□□□□ -1.05
CLIP1-214ENST00000540539 HBA1P69905 142 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms