RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 SURF4O15260 269 aa15.62■□□□□ 0.09
SNRPA1-203ENST00000540017 SLC25A16P16260 332 aa15.62■□□□□ 0.09
SNRPA1-203ENST00000540017 ZNF823P16415 610 aa15.62■□□□□ 0.09
SNRPA1-203ENST00000540017 GCH1P30793 250 aa15.62■□□□□ 0.09
SNRPA1-203ENST00000540017 MAGEB1P43366 347 aa15.62■□□□□ 0.09
SNRPA1-203ENST00000540017 MMP15P51511 669 aa15.62■□□□□ 0.09
SNRPA1-203ENST00000540017 ACTR3P61158 418 aa15.62■□□□□ 0.09
SNRPA1-203ENST00000540017 ARL9Q6T311 187 aa15.62■□□□□ 0.09
SNRPA1-203ENST00000540017 UNQ6126/PRO20091Q6UXV3 157 aa15.62■□□□□ 0.09
SNRPA1-203ENST00000540017 HIPK1Q86Z02 1210 aa15.62■□□□□ 0.09
SNRPA1-203ENST00000540017 OR2AJ1Q8NGZ0 328 aa15.62■□□□□ 0.09
SNRPA1-203ENST00000540017 PYDC1Q8WXC3 89 aa15.62■□□□□ 0.09
SNRPA1-203ENST00000540017 PITX2Q99697 317 aa15.62■□□□□ 0.09
SNRPA1-203ENST00000540017 SEMA6AQ9H2E6 1030 aa15.62■□□□□ 0.09
SNRPA1-203ENST00000540017 SLC25A19Q9HC21 320 aa15.62■□□□□ 0.09
SNRPA1-203ENST00000540017 KIF17Q9P2E2 1029 aa15.62■□□□□ 0.09
SNRPA1-203ENST00000540017 KCNG2Q9UJ96 466 aa15.62■□□□□ 0.09
SNRPA1-203ENST00000540017 LOC390937A0A1W2PQ73 354 aa15.61■□□□□ 0.09
SNRPA1-203ENST00000540017 C17orf100A8MU93 164 aa15.61■□□□□ 0.09
SNRPA1-203ENST00000540017 H3BNX3 289 aa15.61■□□□□ 0.09
SNRPA1-203ENST00000540017 HEXAP06865 529 aa15.61■□□□□ 0.09
SNRPA1-203ENST00000540017 ERCC1P07992 297 aaPredicted RBP15.61■□□□□ 0.09
SNRPA1-203ENST00000540017 ZNF23P17027 643 aa15.61■□□□□ 0.09
SNRPA1-203ENST00000540017 COL8A2P25067 703 aa15.61■□□□□ 0.09
SNRPA1-203ENST00000540017 FMO3P31513 532 aa15.61■□□□□ 0.09
SNRPA1-203ENST00000540017 CRISP1P54107 249 aa15.61■□□□□ 0.09
SNRPA1-203ENST00000540017 PSG7Q13046 419 aa15.61■□□□□ 0.09
SNRPA1-203ENST00000540017 PCK2Q16822 640 aa15.61■□□□□ 0.09
SNRPA1-203ENST00000540017 NAA40Q86UY6 237 aa15.61■□□□□ 0.09
SNRPA1-203ENST00000540017 C1orf174Q8IYL3 243 aa15.61■□□□□ 0.09
SNRPA1-203ENST00000540017 ZNF786Q8N393 782 aa15.61■□□□□ 0.09
SNRPA1-203ENST00000540017 PARP8Q8N3A8 854 aa15.61■□□□□ 0.09
SNRPA1-203ENST00000540017 OR6K6Q8NGW6 343 aa15.61■□□□□ 0.09
SNRPA1-203ENST00000540017 UBASH3BQ8TF42 649 aa15.61■□□□□ 0.09
SNRPA1-203ENST00000540017 DNAJC9Q8WXX5 260 aa15.61■□□□□ 0.09
SNRPA1-203ENST00000540017 OTULINQ96BN8 352 aa15.61■□□□□ 0.09
SNRPA1-203ENST00000540017 ATF6BQ99941 703 aa15.61■□□□□ 0.09
SNRPA1-203ENST00000540017 MYOZ1Q9NP98 299 aaPredicted RBP15.61■□□□□ 0.09
SNRPA1-203ENST00000540017 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.61■□□□□ 0.09
SNRPA1-203ENST00000540017 CSPG4Q6UVK1 2322 aa15.6■□□□□ 0.09
SNRPA1-203ENST00000540017 H3BSA7 217 aa15.6■□□□□ 0.09
SNRPA1-203ENST00000540017 ZNF593O00488 134 aaPredicted RBP15.6■□□□□ 0.09
SNRPA1-203ENST00000540017 HMGN1P05114 100 aa15.6■□□□□ 0.09
SNRPA1-203ENST00000540017 ACSM4P0C7M7 580 aa15.6■□□□□ 0.09
SNRPA1-203ENST00000540017 FCGR1AP12314 374 aa15.6■□□□□ 0.09
SNRPA1-203ENST00000540017 ANOS1P23352 680 aa15.6■□□□□ 0.09
SNRPA1-203ENST00000540017 EPHA2P29317 976 aa15.6■□□□□ 0.09
SNRPA1-203ENST00000540017 NR4A2P43354 598 aa15.6■□□□□ 0.09
SNRPA1-203ENST00000540017 ENTPD1P49961 510 aa15.6■□□□□ 0.09
SNRPA1-203ENST00000540017 CCL8P80075 99 aa15.6■□□□□ 0.09
SNRPA1-203ENST00000540017 LOXL1Q08397 574 aaPredicted RBP15.6■□□□□ 0.09
SNRPA1-203ENST00000540017 KDM4DQ6B0I6 523 aa15.6■□□□□ 0.09
SNRPA1-203ENST00000540017 PLBD1Q6P4A8 553 aa15.6■□□□□ 0.09
SNRPA1-203ENST00000540017 DCXRQ7Z4W1 244 aa15.6■□□□□ 0.09
SNRPA1-203ENST00000540017 BBS1Q8NFJ9 593 aa15.6■□□□□ 0.09
SNRPA1-203ENST00000540017 CMBLQ96DG6 245 aa15.6■□□□□ 0.09
SNRPA1-203ENST00000540017 DCLRE1CQ96SD1 692 aaKnown RBP15.6■□□□□ 0.09
SNRPA1-203ENST00000540017 BPESC1Q9GZL8 116 aa15.6■□□□□ 0.09
SNRPA1-203ENST00000540017 GABARAPL1Q9H0R8 117 aa15.6■□□□□ 0.09
SNRPA1-203ENST00000540017 OR51V1Q9H2C8 321 aa15.6■□□□□ 0.09
SNRPA1-203ENST00000540017 GPR160Q9UJ42 338 aa15.6■□□□□ 0.09
SNRPA1-203ENST00000540017 ZSCAN5BA6NJL1 495 aa15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 PRR23D1E9PI22 279 aaPredicted RBP15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 F5H5K5 113 aa15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 NDUFS8O00217 210 aa15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 GLCEO94923 617 aa15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 SPARCP09486 303 aa15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 PRR23D2P0DMB1 279 aaPredicted RBP15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 GIFP27352 417 aa15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 HLXQ14774 488 aaPredicted RBP15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 PTGES3Q15185 160 aaKnown RBP15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 MOGQ16653 247 aa15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 TEX30Q5JUR7 227 aa15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 COLCA1Q6ZS62 124 aa15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 ZDHHC13Q8IUH4 622 aa15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 CPOQ8IVL8 374 aa15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 SNX33Q8WV41 574 aa15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 YIPF5Q969M3 257 aa15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 CENPNQ96H22 339 aaPredicted RBP15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 PKP2Q99959 881 aa15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 PIMREGQ9BSJ6 248 aa15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 MARCH7Q9H992 704 aa15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 KRT84Q9NSB2 600 aa15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 TVP23BQ9NYZ1 205 aa15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 PTTG3PQ9NZH4 202 aa15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 TMEFF2Q9UIK5 374 aaPredicted RBP15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 OAZ3Q9UMX2 235 aa15.59■□□□□ 0.09
SNRPA1-203ENST00000540017 NF1P21359 2839 aa15.58■□□□□ 0.09
SNRPA1-203ENST00000540017 IGHV4-61A0A0C4DH41 118 aa15.58■□□□□ 0.08
SNRPA1-203ENST00000540017 IGHV1-46P01743 117 aa15.58■□□□□ 0.08
SNRPA1-203ENST00000540017 PAICSP22234 425 aaKnown RBP15.58■□□□□ 0.08
SNRPA1-203ENST00000540017 USF1P22415 310 aaPredicted RBP15.58■□□□□ 0.08
SNRPA1-203ENST00000540017 GSTT1P30711 240 aa15.58■□□□□ 0.08
SNRPA1-203ENST00000540017 RGS6P49758 472 aa15.58■□□□□ 0.08
SNRPA1-203ENST00000540017 ZNF81P51508 661 aa15.58■□□□□ 0.08
SNRPA1-203ENST00000540017 ESRRGP62508 458 aa15.58■□□□□ 0.08
SNRPA1-203ENST00000540017 ECH1Q13011 328 aa15.58■□□□□ 0.08
SNRPA1-203ENST00000540017 RIN1Q13671 783 aa15.58■□□□□ 0.08
SNRPA1-203ENST00000540017 GGTLC2Q14390 218 aa15.58■□□□□ 0.08
SNRPA1-203ENST00000540017 SPRNQ5BIV9 151 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms