RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 PPP3R1P63098 170 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 SLC3A1Q07837 685 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 DYNC1I2Q13409 638 aaKnown RBP10.35□□□□□ -0.75
VTN-202ENST00000539746 ST3GAL2Q16842 350 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 SOWAHCQ53LP3 525 aaPredicted RBP10.35□□□□□ -0.75
VTN-202ENST00000539746 TIMM23BQ5SRD1 257 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 MZT2AQ6P582 158 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 LRRN1Q6UXK5 716 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 B3GLCTQ6Y288 498 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 PGAP1Q75T13 922 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 DOK3Q7L591 496 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 COMMD2Q86X83 199 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 GCNT2Q8N0V5 402 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 LRRC18Q8N456 261 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 TSEN15Q8WW01 171 aaKnown RBP10.35□□□□□ -0.75
VTN-202ENST00000539746 ACOT12Q8WYK0 555 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 HSD17B8Q92506 261 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 GHSRQ92847 366 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 FOXRED1Q96CU9 486 aaPredicted RBP10.35□□□□□ -0.75
VTN-202ENST00000539746 ZNF799Q96GE5 643 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 PGAM5Q96HS1 289 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 C4orf45Q96LM5 186 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 TCF7L1Q9HCS4 588 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 EMC7Q9NPA0 242 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 SLCO1C1Q9NYB5 712 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 RABL2AQ9UBK7 228 aaPredicted RBP10.35□□□□□ -0.75
VTN-202ENST00000539746 ADAM30Q9UKF2 790 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 OR52A1Q9UKL2 312 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 RABL2BQ9UNT1 228 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 MPDZO75970 2070 aa10.35□□□□□ -0.75
VTN-202ENST00000539746 TRAV1-2A0A0B4J238 106 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 LOC390937A0A1W2PQ73 354 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 H3BMQ9 156 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 H3BSA7 217 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 ANXA2P07355 339 aaKnown RBP10.34□□□□□ -0.75
VTN-202ENST00000539746 SELEP16581 610 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 ZNF20P17024 532 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 AGAP20933 346 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 S100A5P33763 92 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 RORCP51449 518 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 RPS23P62266 143 aaKnown RBP10.34□□□□□ -0.75
VTN-202ENST00000539746 RAB1AP62820 205 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 PMPCAQ10713 525 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 ENDOGQ14249 297 aaKnown RBP10.34□□□□□ -0.75
VTN-202ENST00000539746 CNPY1Q3B7I2 92 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 TBRG1Q3YBR2 411 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 HSD17B12Q53GQ0 312 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 SFRP5Q5T4F7 317 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 ZBTB37Q5TC79 503 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 FOXB2Q5VYV0 432 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 BHLHA15Q7RTS1 189 aaPredicted RBP10.34□□□□□ -0.75
VTN-202ENST00000539746 CATSPERDQ86XM0 798 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 LINC00346Q8IVM7 164 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 NKAIN3Q8N8D7 197 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 OR5D14Q8NGL3 314 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 RPS4Y2Q8TD47 263 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 PP6455Q8WZ26 134 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 SGCDQ92629 289 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 APOBEC3DQ96AK3 386 aaPredicted RBP10.34□□□□□ -0.75
VTN-202ENST00000539746 KCTD12Q96CX2 325 aaKnown RBP10.34□□□□□ -0.75
VTN-202ENST00000539746 STARD4Q96DR4 205 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 CHCHD6Q9BRQ6 235 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 ZNF649Q9BS31 505 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 TMED9Q9BVK6 235 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 RBM38Q9H0Z9 239 aaKnown RBP10.34□□□□□ -0.75
VTN-202ENST00000539746 ISG20L2Q9H9L3 353 aaKnown RBP10.34□□□□□ -0.75
VTN-202ENST00000539746 SNTG1Q9NSN8 517 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 CCDC59Q9P031 241 aaKnown RBP10.34□□□□□ -0.75
VTN-202ENST00000539746 COPS3Q9UNS2 423 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 MEMO1Q9Y316 297 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 FAM215AQ9Y5M1 114 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 AKAP13Q12802 2813 aa10.34□□□□□ -0.75
VTN-202ENST00000539746 ANKRD11Q6UB99 2663 aaPredicted RBP10.33□□□□□ -0.76
VTN-202ENST00000539746 FREM2Q5SZK8 3169 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 PNMA8CA0A1B0GUJ8 204 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 ANKRD61A6NGH8 418 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 EEF1E1-BLOC1S5C9J1V9 151 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 C16orf97H3BN30 126 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 CASKO14936 926 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 EEF1E1O43324 174 aaKnown RBP10.33□□□□□ -0.76
VTN-202ENST00000539746 SYT7O43581 403 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 TNFSF13O75888 250 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 MPZL1O95297 269 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 ABHD16AO95870 558 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 CBR1P16152 277 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 ZNF32P17041 273 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 KLK2P20151 261 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 GADD45AP24522 165 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 OTX1P32242 354 aaPredicted RBP10.33□□□□□ -0.76
VTN-202ENST00000539746 GNALP38405 381 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 DDOSTP39656 456 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 ASCL1P50553 236 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 SCAND1P57086 179 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 GALK2Q01415 458 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 MZT1Q08AG7 82 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 NFATC3Q12968 1075 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 DOC2BQ14184 412 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 MOGQ16653 247 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 ACSM3Q53FZ2 586 aa10.33□□□□□ -0.76
VTN-202ENST00000539746 CEACAM19Q7Z692 300 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms