RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 H3BN98 237 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 RP2O75695 350 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 IFNGP01579 166 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 MMP7P09237 267 aaPredicted RBP12.72□□□□□ -0.37
USB1-203ENST00000539737 CCL2P13500 99 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 ZNF35P13682 527 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 LAP3P28838 519 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 APLNRP35414 380 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.72□□□□□ -0.37
USB1-203ENST00000539737 KPNB1Q14974 876 aaKnown RBP12.72□□□□□ -0.37
USB1-203ENST00000539737 MOGQ16653 247 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 NKPD1Q17RQ9 610 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 TBC1D28Q2M2D7 210 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 SLC36A3Q495N2 470 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 RGS7BPQ6MZT1 257 aaPredicted RBP12.72□□□□□ -0.37
USB1-203ENST00000539737 ZFP1Q6P2D0 407 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 HS3ST5Q8IZT8 346 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 PAQR4Q8N4S7 273 aaPredicted RBP12.72□□□□□ -0.37
USB1-203ENST00000539737 SLC30A7Q8NEW0 376 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 SDR9C7Q8NEX9 313 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 OR51F2Q8NH61 342 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 FAM216AQ8WUB2 273 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 SNX33Q8WV41 574 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 NMNAT3Q96T66 252 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 TMPRSS13Q9BYE2 586 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 NUAK2Q9H093 628 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 RERGLQ9H628 205 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 NTN4Q9HB63 628 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 G6PC2Q9NQR9 355 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 KLHL21Q9UJP4 597 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 GRIP1Q9Y3R0 1128 aa12.72□□□□□ -0.37
USB1-203ENST00000539737 TMPRSS2O15393 492 aa12.71□□□□□ -0.37
USB1-203ENST00000539737 MT-ND5P03915 603 aa12.71□□□□□ -0.37
USB1-203ENST00000539737 FAM157BP0CG42 384 aa12.71□□□□□ -0.37
USB1-203ENST00000539737 OSMP13725 252 aa12.71□□□□□ -0.37
USB1-203ENST00000539737 PCMT1P22061 227 aa12.71□□□□□ -0.37
USB1-203ENST00000539737 GRK5P34947 590 aa12.71□□□□□ -0.37
USB1-203ENST00000539737 RAD52P43351 418 aa12.71□□□□□ -0.37
USB1-203ENST00000539737 DEFA6Q01524 100 aa12.71□□□□□ -0.37
USB1-203ENST00000539737 GLO1Q04760 184 aa12.71□□□□□ -0.37
USB1-203ENST00000539737 SLC35F1Q5T1Q4 408 aa12.71□□□□□ -0.37
USB1-203ENST00000539737 SLC27A4Q6P1M0 643 aa12.71□□□□□ -0.37
USB1-203ENST00000539737 SYT9Q86SS6 491 aa12.71□□□□□ -0.37
USB1-203ENST00000539737 ZDHHC13Q8IUH4 622 aa12.71□□□□□ -0.37
USB1-203ENST00000539737 OR52E2Q8NGJ4 325 aa12.71□□□□□ -0.37
USB1-203ENST00000539737 SGMS2Q8NHU3 365 aa12.71□□□□□ -0.37
USB1-203ENST00000539737 C11orf40Q8WZ69 217 aa12.71□□□□□ -0.37
USB1-203ENST00000539737 RDH5Q92781 318 aa12.71□□□□□ -0.37
USB1-203ENST00000539737 RPRD1BQ9NQG5 326 aaKnown RBP12.71□□□□□ -0.37
USB1-203ENST00000539737 A0A0A6YYJ9 748 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 IGLV1-36A0A0B4J1U3 117 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 RIIAD1A6NNX1 92 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 G3V2T6 193 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 TRIM77I1YAP6 450 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 PLPP2O43688 288 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 MPZL1O95297 269 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 PNPP00491 289 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 LCKP06239 509 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 ZNF3P17036 446 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 ZNF32P17041 273 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 ACHEP22303 614 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 LSM6P62312 80 aaKnown RBP12.7□□□□□ -0.38
USB1-203ENST00000539737 GABPB1Q06547 395 aaPredicted RBP12.7□□□□□ -0.38
USB1-203ENST00000539737 SCRN3Q0VDG4 424 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 AQP6Q13520 282 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 ENDOGQ14249 297 aaKnown RBP12.7□□□□□ -0.38
USB1-203ENST00000539737 PABPC1L2AQ5JQF8 200 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 FAHD1Q6P587 224 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 TMEM154Q6P9G4 183 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 ZBTB46Q86UZ6 589 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 ZNF584Q8IVC4 421 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 PARP8Q8N3A8 854 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 NPEPL1Q8NDH3 523 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 ICA1LQ8NDH6 482 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 OR2T4Q8NH00 348 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 OR4Q3Q8NH05 313 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 ZFAND2BQ8WV99 257 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 PYDC1Q8WXC3 89 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 LRTOMTQ8WZ04 291 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 CENPNQ96H22 339 aaPredicted RBP12.7□□□□□ -0.38
USB1-203ENST00000539737 ZNF416Q9BWM5 594 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 TEX12Q9BXU0 123 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 BCL2L14Q9BZR8 327 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 GABARAPL1Q9H0R8 117 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 EMC7Q9NPA0 242 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 PAPOLBQ9NRJ5 636 aaKnown RBP12.7□□□□□ -0.38
USB1-203ENST00000539737 SLCO1C1Q9NYB5 712 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 EIF3KQ9UBQ5 218 aaKnown RBP12.7□□□□□ -0.38
USB1-203ENST00000539737 B9D1Q9UPM9 204 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 COA3Q9Y2R0 106 aaPredicted RBP12.7□□□□□ -0.38
USB1-203ENST00000539737 POLR1DQ9Y2S0 133 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 TIMM10BQ9Y5J6 103 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 NOTCH1P46531 2555 aa12.7□□□□□ -0.38
USB1-203ENST00000539737 OR6C68A6NDL8 312 aa12.69□□□□□ -0.38
USB1-203ENST00000539737 SNAP29O95721 258 aa12.69□□□□□ -0.38
USB1-203ENST00000539737 PRKACGP22612 351 aa12.69□□□□□ -0.38
USB1-203ENST00000539737 POU1F1P28069 291 aa12.69□□□□□ -0.38
USB1-203ENST00000539737 CENPAP49450 140 aa12.69□□□□□ -0.38
USB1-203ENST00000539737 KLF3P57682 345 aaPredicted RBP12.69□□□□□ -0.38
USB1-203ENST00000539737 CCL8P80075 99 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms