RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ZNF687Q8N1G0 1237 aa13.2□□□□□ -0.3
CACNB1-206ENST00000539338 OR4N2Q8NGD1 307 aa13.2□□□□□ -0.3
CACNB1-206ENST00000539338 ANKRD9Q96BM1 317 aaPredicted RBP13.2□□□□□ -0.3
CACNB1-206ENST00000539338 CCDC74BQ96LY2 380 aa13.2□□□□□ -0.3
CACNB1-206ENST00000539338 C12orf49Q9H741 205 aa13.2□□□□□ -0.3
CACNB1-206ENST00000539338 NECAP2Q9NVZ3 263 aa13.2□□□□□ -0.3
CACNB1-206ENST00000539338 ZNF705GA8MUZ8 300 aaPredicted RBP13.19□□□□□ -0.3
CACNB1-206ENST00000539338 LMO7DNF2Z398 122 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 SGCEO43556 437 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 CLDN20P56880 219 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 DBPQ10586 325 aaPredicted RBP13.19□□□□□ -0.3
CACNB1-206ENST00000539338 DOK3Q7L591 496 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 MAML2Q8IZL2 1156 aaPredicted RBP13.19□□□□□ -0.3
CACNB1-206ENST00000539338 CPEB3Q8NE35 698 aaKnown RBP13.19□□□□□ -0.3
CACNB1-206ENST00000539338 PRR7Q8TB68 274 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 DERL3Q96Q80 235 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 CRYBA1P05813 215 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 PTGER4P35408 488 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 KIR2DL3P43628 341 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 AMER3Q8N944 861 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 SEMA6DQ8NFY4 1073 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 SLIRPQ9GZT3 109 aaKnown RBP13.19□□□□□ -0.3
CACNB1-206ENST00000539338 PLSCR3Q9NRY6 295 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 F5P12259 2224 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 KCNE1BA0A087WTH5 132 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 PMS2P1A4D2B8 440 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 RNF212BA8MTL3 300 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 HSD17B6O14756 317 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 ALX3O95076 343 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 NXPH2O95156 264 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 CLDN1O95832 211 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 SERPINF1P36955 418 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 CAPZBP47756 277 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 AKR1C1Q04828 323 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 BATFQ16520 125 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 C2orf76Q3KRA6 126 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 ATPAF1Q5TC12 328 aaPredicted RBP13.19□□□□□ -0.3
CACNB1-206ENST00000539338 PRSS35Q8N3Z0 413 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 SLC5A6Q9Y289 635 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 TMEM200CA6NKL6 621 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 TAS2R30P59541 319 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 SLC25A43Q8WUT9 341 aaPredicted RBP13.19□□□□□ -0.3
CACNB1-206ENST00000539338 LRFN5Q96NI6 719 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 FAM234AQ9H0X4 552 aa13.19□□□□□ -0.3
CACNB1-206ENST00000539338 IGLV3-16A0A075B6K0 115 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 TGM6O95932 706 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 C12orf73Q69YU5 71 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 OR4Q3Q8NH05 313 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 NUDCD2Q8WVJ2 157 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 RAB39BQ96DA2 213 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 SUCNR1Q9BXA5 334 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 PRMT8Q9NR22 394 aaPredicted RBP13.18□□□□□ -0.3
CACNB1-206ENST00000539338 PRSS37A4D1T9 235 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 DCTDP32321 178 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 ZNF133P52736 654 aaPredicted RBP13.18□□□□□ -0.3
CACNB1-206ENST00000539338 LPCAT3Q6P1A2 487 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 ZNF793Q6ZN11 406 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 SLC30A7Q8NEW0 376 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 MARC2Q969Z3 335 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 SDHAF2Q9NX18 166 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 LHX6Q9UPM6 363 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 SLC17A4Q9Y2C5 497 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 COL4A1P02462 1669 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 FTH1P19P0C7X4 201 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 CBR1P16152 277 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 SSX2Q16385 188 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 C19orf48Q6RUI8 117 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 MED18Q9BUE0 208 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 EXOSC3Q9NQT5 275 aaKnown RBP13.18□□□□□ -0.3
CACNB1-206ENST00000539338 PRDM7Q9NQW5 492 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 ASCC3Q8N3C0 2202 aaKnown RBP13.18□□□□□ -0.3
CACNB1-206ENST00000539338 SDCBPO00560 298 aaPredicted RBP13.18□□□□□ -0.3
CACNB1-206ENST00000539338 CD3DP04234 171 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 MENTQ9BUN1 341 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 CSAG2Q9Y5P2 127 aa13.18□□□□□ -0.3
CACNB1-206ENST00000539338 FAM166BA8MTA8 275 aa13.17□□□□□ -0.3
CACNB1-206ENST00000539338 SRPXP78539 464 aa13.17□□□□□ -0.3
CACNB1-206ENST00000539338 SOHLH1Q5JUK2 328 aa13.17□□□□□ -0.3
CACNB1-206ENST00000539338 SIGLEC11Q96RL6 698 aa13.17□□□□□ -0.3
CACNB1-206ENST00000539338 SCPEP1Q9HB40 452 aa13.17□□□□□ -0.3
CACNB1-206ENST00000539338 SLCO1C1Q9NYB5 712 aa13.17□□□□□ -0.3
CACNB1-206ENST00000539338 CTSFQ9UBX1 484 aa13.17□□□□□ -0.3
CACNB1-206ENST00000539338 EFSO43281 561 aa13.17□□□□□ -0.3
CACNB1-206ENST00000539338 OIP5O43482 229 aa13.17□□□□□ -0.3
CACNB1-206ENST00000539338 LYPD8Q6UX82 237 aa13.17□□□□□ -0.3
CACNB1-206ENST00000539338 CCDC190Q86UF4 302 aa13.17□□□□□ -0.3
CACNB1-206ENST00000539338 OR1J2Q8NGS2 313 aa13.17□□□□□ -0.3
CACNB1-206ENST00000539338 OR11L1Q8NGX0 322 aa13.17□□□□□ -0.3
CACNB1-206ENST00000539338 DUSP15Q9H1R2 295 aaPredicted RBP13.17□□□□□ -0.3
CACNB1-206ENST00000539338 SLC22A11Q9NSA0 550 aa13.17□□□□□ -0.3
CACNB1-206ENST00000539338 B3GALT5Q9Y2C3 310 aa13.17□□□□□ -0.3
CACNB1-206ENST00000539338 H0YIG0 161 aa13.17□□□□□ -0.3
CACNB1-206ENST00000539338 PI3P19957 117 aa13.17□□□□□ -0.3
CACNB1-206ENST00000539338 KITLGP21583 273 aa13.17□□□□□ -0.3
CACNB1-206ENST00000539338 DMRTC1Q5HYR2 192 aa13.17□□□□□ -0.3
CACNB1-206ENST00000539338 TRMT61AQ96FX7 289 aaKnown RBP13.17□□□□□ -0.3
CACNB1-206ENST00000539338 GPR84Q9NQS5 396 aa13.17□□□□□ -0.3
CACNB1-206ENST00000539338 KLK11Q9UBX7 282 aa13.17□□□□□ -0.3
CACNB1-206ENST00000539338 GPR171O14626 319 aa13.17□□□□□ -0.3
CACNB1-206ENST00000539338 GNB3P16520 340 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms