RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 NKAIN3Q8N8D7 197 aa12.44□□□□□ -0.42
LIMK1-208ENST00000538333 OR4C16Q8NGL9 310 aa12.44□□□□□ -0.42
LIMK1-208ENST00000538333 GPX8Q8TED1 209 aa12.44□□□□□ -0.42
LIMK1-208ENST00000538333 DACT3Q96B18 629 aaPredicted RBP12.44□□□□□ -0.42
LIMK1-208ENST00000538333 ATG5Q9H1Y0 275 aa12.44□□□□□ -0.42
LIMK1-208ENST00000538333 CDCP1Q9H5V8 836 aa12.44□□□□□ -0.42
LIMK1-208ENST00000538333 DLL4Q9NR61 685 aa12.44□□□□□ -0.42
LIMK1-208ENST00000538333 SLC39A1Q9NY26 324 aa12.44□□□□□ -0.42
LIMK1-208ENST00000538333 PTTG3PQ9NZH4 202 aa12.44□□□□□ -0.42
LIMK1-208ENST00000538333 ZDBF2Q9HCK1 2354 aa12.44□□□□□ -0.42
LIMK1-208ENST00000538333 KIAA1549Q9HCM3 1950 aa12.44□□□□□ -0.42
LIMK1-208ENST00000538333 NCOA6Q14686 2063 aaPredicted RBP12.43□□□□□ -0.42
LIMK1-208ENST00000538333 PMS2P2O95744 297 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 CSF1P09603 554 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 LIFP15018 202 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 PRSS3P35030 304 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 SSR4P51571 173 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 KCNMB1Q16558 191 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 CARD17Q5XLA6 110 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 KLHL24Q6TFL4 600 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 ZNF813Q6ZN06 617 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 CREB3L2Q70SY1 520 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 RHOUQ7L0Q8 258 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 CLEC1AQ8NC01 280 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 OR4D10Q8NGI6 311 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 MED30Q96HR3 178 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 NECAB3Q96P71 396 aaPredicted RBP12.43□□□□□ -0.42
LIMK1-208ENST00000538333 SEC61A2Q9H9S3 476 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 MGAT4AQ9UM21 535 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 NCOR1O75376 2440 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 ZNF878C9JN71 531 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 G3V3Q6 166 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 ZIC3O60481 467 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 GP1BAP07359 652 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 FAUP35544 74 aaKnown RBP12.43□□□□□ -0.42
LIMK1-208ENST00000538333 MLF1P58340 268 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 SSBP1Q04837 148 aaKnown RBP12.43□□□□□ -0.42
LIMK1-208ENST00000538333 ANGPT1Q15389 498 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 CSRP2Q16527 193 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 SLC25A25Q6KCM7 469 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 JAGN1Q8N5M9 183 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 OR4D6Q8NGJ1 314 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 FGGYQ96C11 551 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 ADAT3Q96EY9 351 aaPredicted RBP12.43□□□□□ -0.42
LIMK1-208ENST00000538333 GNRHR2Q96P88 292 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 SEC22CQ9BRL7 303 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 SMOC1Q9H4F8 434 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 PNRC2Q9NPJ4 139 aaKnown RBP12.43□□□□□ -0.42
LIMK1-208ENST00000538333 SDK2Q58EX2 2172 aa12.43□□□□□ -0.42
LIMK1-208ENST00000538333 TTC28Q96AY4 2481 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 NSG1A0A0A6YYJ2 146 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 A0A1B0GTI1 187 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 B4E171 279 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 MASP2O00187 686 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 IL5P05113 134 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 QDPRP09417 244 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 CPN1P15169 458 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 ANXA7P20073 488 aaKnown RBP12.42□□□□□ -0.42
LIMK1-208ENST00000538333 ACP1P24666 158 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 TSPAN7P41732 249 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 SELENOPP49908 381 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 DSCR4P56555 118 aaPredicted RBP12.42□□□□□ -0.42
LIMK1-208ENST00000538333 PSMA6P60900 246 aaKnown RBP12.42□□□□□ -0.42
LIMK1-208ENST00000538333 GALK2Q01415 458 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 RBMS2Q15434 407 aaKnown RBP12.42□□□□□ -0.42
LIMK1-208ENST00000538333 CCDC92Q53HC0 331 aaPredicted RBP12.42□□□□□ -0.42
LIMK1-208ENST00000538333 ZNF529Q6P280 563 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 LUZP2Q86TE4 346 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 RPS19BP1Q86WX3 136 aaKnown RBP12.42□□□□□ -0.42
LIMK1-208ENST00000538333 OR1J2Q8NGS2 313 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 ZNF431Q8TF32 576 aaPredicted RBP12.42□□□□□ -0.42
LIMK1-208ENST00000538333 PTX4Q96A99 478 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 FOXRED1Q96CU9 486 aaPredicted RBP12.42□□□□□ -0.42
LIMK1-208ENST00000538333 GPR137Q96N19 417 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 ZNF436Q9C0F3 470 aaPredicted RBP12.42□□□□□ -0.42
LIMK1-208ENST00000538333 ZNF160Q9HCG1 818 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 A0A0A6YYH2 397 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 MEIS3P1A6NDR6 274 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 A6NJ64 397 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 SULT1C2O00338 296 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 SYT7O43581 403 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 HSD11B1P28845 292 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 FOLR3P41439 243 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 CLDN6P56747 220 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 ZNF626Q68DY1 528 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 ZNF782Q6ZMW2 699 aaPredicted RBP12.42□□□□□ -0.42
LIMK1-208ENST00000538333 SEH1LQ96EE3 360 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 SORCS2Q96PQ0 1159 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 MOB1AQ9H8S9 216 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 ASH2LQ9UBL3 628 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 SCP2D1Q9UJQ7 156 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 POLR1DQ9Y2S0 133 aa12.42□□□□□ -0.42
LIMK1-208ENST00000538333 BDP1A6H8Y1 2624 aa12.41□□□□□ -0.42
LIMK1-208ENST00000538333 WDFY4Q6ZS81 3184 aa12.41□□□□□ -0.42
LIMK1-208ENST00000538333 ZNF726A6NNF4 738 aa12.41□□□□□ -0.42
LIMK1-208ENST00000538333 PYCARD-AS1I3L0S3 204 aa12.41□□□□□ -0.42
LIMK1-208ENST00000538333 AKAIN1P0CW23 69 aa12.41□□□□□ -0.42
LIMK1-208ENST00000538333 BDKRB2P30411 391 aa12.41□□□□□ -0.42
LIMK1-208ENST00000538333 CLDN17P56750 224 aa12.41□□□□□ -0.42
LIMK1-208ENST00000538333 GABREP78334 506 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms