RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 RBBP6Q7Z6E9 1792 aaKnown RBP4.84□□□□□ -1.63
LRP6-203ENST00000538239 CLEC3BP05452 202 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 IGHV4-34P06331 123 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 KITLGP21583 273 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 ETV1P50549 477 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 MFGE8Q08431 387 aaPredicted RBP4.84□□□□□ -1.63
LRP6-203ENST00000538239 DYRK1AQ13627 763 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 PDLIM3Q53GG5 364 aaPredicted RBP4.84□□□□□ -1.63
LRP6-203ENST00000538239 LIPNQ5VXI9 398 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 RHBDD2Q6NTF9 364 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 IDO2Q6ZQW0 420 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 ZNF573Q86YE8 665 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 GTPBP8Q8N3Z3 284 aaPredicted RBP4.84□□□□□ -1.63
LRP6-203ENST00000538239 OR1M1Q8NGA1 313 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 TRMT61AQ96FX7 289 aaKnown RBP4.84□□□□□ -1.63
LRP6-203ENST00000538239 PBDC1Q9BVG4 233 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 SLCO5A1Q9H2Y9 848 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 FAM221AA4D161 298 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 CDX4O14627 284 aaPredicted RBP4.84□□□□□ -1.63
LRP6-203ENST00000538239 DHHO43323 396 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 IL1AP01583 271 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 OR2L13Q8N349 312 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 OPALINQ96PE5 141 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 BCL7BQ9BQE9 202 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 NMNAT2Q9BZQ4 307 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 SHARPINQ9H0F6 387 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 BCO1Q9HAY6 547 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 ZFP64Q9NPA5 681 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 A0A087WUJ7 227 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 TOX3O15405 576 aaPredicted RBP4.84□□□□□ -1.63
LRP6-203ENST00000538239 GPR137BO60478 399 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 GLAP06280 429 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 SBK3P0C264 359 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 ANXA7P20073 488 aaKnown RBP4.84□□□□□ -1.63
LRP6-203ENST00000538239 S100A7P31151 101 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 MESP2Q0VG99 397 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 KDM4DQ6B0I6 523 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 UBAC2Q8NBM4 344 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 RND1Q92730 232 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 RPL3LQ92901 407 aaKnown RBP4.84□□□□□ -1.63
LRP6-203ENST00000538239 ZNF419Q96HQ0 510 aaPredicted RBP4.84□□□□□ -1.63
LRP6-203ENST00000538239 A3GALT2U3KPV4 340 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 CD160O95971 181 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 CSF3P09919 207 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 OR8U8P0C7N1 319 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 TNFSF8P32971 234 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 GALNSP34059 522 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 SFTPA2Q8IWL1 248 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 C19orf43Q9BQ61 176 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 IKZF5Q9H5V7 419 aa4.84□□□□□ -1.63
LRP6-203ENST00000538239 HINT3Q9NQE9 182 aaKnown RBP4.84□□□□□ -1.63
LRP6-203ENST00000538239 LINC01387J3KSC0 135 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 AGPAT2O15120 278 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 CT62P0C5K7 136 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 CCL2P13500 99 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 RAB11AP62491 216 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 ZNF674Q2M3X9 581 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 CDONQ4KMG0 1287 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 PLA1AQ53H76 456 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 PRSS42Q7Z5A4 293 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 S100A7AQ86SG5 101 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 LAX1Q8IWV1 398 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 C12orf45Q8N5I9 185 aaPredicted RBP4.84□□□□□ -1.64
LRP6-203ENST00000538239 OR2Y1Q8NGV0 311 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 OR51H1Q8NH63 302 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 KCNJ15Q99712 375 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 CENPOQ9BU64 300 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 ZCCHC4Q9H5U6 513 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 CMC2Q9NRP2 79 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 C1orf123Q9NWV4 160 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 C21orf140B9A014 251 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 ACOT8O14734 319 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 SPRY1O43609 319 aaPredicted RBP4.84□□□□□ -1.64
LRP6-203ENST00000538239 GPANK1O95872 356 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 SBK2P0C263 348 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 CD82P27701 267 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 ARRB2P32121 409 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 MTNR1BP49286 362 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 GSK3AP49840 483 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 NKX2-5P52952 324 aaPredicted RBP4.84□□□□□ -1.64
LRP6-203ENST00000538239 PLA2G7Q13093 441 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 DNAJC5GQ8N7S2 189 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 WDSUB1Q8N9V3 476 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 SUMF1Q8NBK3 374 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 GIMAP1Q8WWP7 306 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 ADAT1Q9BUB4 502 aaKnown RBP4.84□□□□□ -1.64
LRP6-203ENST00000538239 SLC26A1Q9H2B4 701 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 RIMS4Q9H426 269 aaPredicted RBP4.84□□□□□ -1.64
LRP6-203ENST00000538239 SLC23A1Q9UHI7 598 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 EXO1Q9UQ84 846 aaKnown RBP4.84□□□□□ -1.64
LRP6-203ENST00000538239 SSUH2Q9Y2M2 353 aa4.84□□□□□ -1.64
LRP6-203ENST00000538239 AQP7O14520 342 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 GPR12P47775 334 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 NPY4RP50391 375 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 TMPRSS3P57727 454 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 STARD6P59095 220 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 GK2Q14410 553 aaPredicted RBP4.83□□□□□ -1.64
LRP6-203ENST00000538239 TMEM81Q6P7N7 255 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 WDR88Q6ZMY6 472 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 PARP16Q8N5Y8 322 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms