RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 PCBD1P61457 104 aa11.23□□□□□ -0.61
CHFR-216ENST00000538235 SMN1Q16637 294 aaKnown RBP11.23□□□□□ -0.61
CHFR-216ENST00000538235 DEFB113Q30KQ7 82 aa11.23□□□□□ -0.61
CHFR-216ENST00000538235 ZCCHC24Q8N2G6 241 aaKnown RBP11.23□□□□□ -0.61
CHFR-216ENST00000538235 MUC15Q8N387 334 aa11.23□□□□□ -0.61
CHFR-216ENST00000538235 OR10H5Q8NGA6 315 aa11.23□□□□□ -0.61
CHFR-216ENST00000538235 IPCEF1Q8WWN9 437 aaPredicted RBP11.23□□□□□ -0.61
CHFR-216ENST00000538235 MRPL24Q96A35 216 aaKnown RBP11.23□□□□□ -0.61
CHFR-216ENST00000538235 SLAMF6Q96DU3 332 aa11.23□□□□□ -0.61
CHFR-216ENST00000538235 MARS2Q96GW9 593 aaKnown RBP11.23□□□□□ -0.61
CHFR-216ENST00000538235 PLEKHA8Q96JA3 519 aa11.23□□□□□ -0.61
CHFR-216ENST00000538235 COQ7Q99807 217 aa11.23□□□□□ -0.61
CHFR-216ENST00000538235 SYT3Q9BQG1 590 aa11.23□□□□□ -0.61
CHFR-216ENST00000538235 RHNO1Q9BSD3 238 aa11.23□□□□□ -0.61
CHFR-216ENST00000538235 DCLRE1BQ9H816 532 aa11.23□□□□□ -0.61
CHFR-216ENST00000538235 ZNF319Q9P2F9 582 aa11.23□□□□□ -0.61
CHFR-216ENST00000538235 YLPM1P49750 1951 aaKnown RBP11.23□□□□□ -0.61
CHFR-216ENST00000538235 SLC16A6O15403 523 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 LILRA1O75019 489 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 IGHV4-39P01824 125 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 SLC2A1P11166 492 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 ALOX5APP20292 161 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 PAICSP22234 425 aaKnown RBP11.22□□□□□ -0.61
CHFR-216ENST00000538235 APOBEC3AP31941 199 aaPredicted RBP11.22□□□□□ -0.61
CHFR-216ENST00000538235 GLRXP35754 106 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 GDI2P50395 445 aaKnown RBP11.22□□□□□ -0.61
CHFR-216ENST00000538235 NUDT6P53370 316 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 AQP4P55087 323 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 UCP2P55851 309 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 RPS7P62081 194 aaKnown RBP11.22□□□□□ -0.61
CHFR-216ENST00000538235 PLP2Q04941 152 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 SLC34A1Q06495 639 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 EIF2B1Q14232 305 aaKnown RBP11.22□□□□□ -0.61
CHFR-216ENST00000538235 SNAI3Q3KNW1 292 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 SPRNQ5BIV9 151 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 SLC35D3Q5M8T2 416 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 ZNF544Q6NX49 715 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 COLCA1Q6ZS62 124 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 MEPCEQ7L2J0 689 aaKnown RBP11.22□□□□□ -0.61
CHFR-216ENST00000538235 PRSS45Q7RTY3 260 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 GJC3Q8NFK1 279 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 OR4F15Q8NGB8 312 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 OTOSQ8NHW6 89 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 ABHD4Q8TB40 342 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 SLC25A40Q8TBP6 338 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 RNF133Q8WVZ7 376 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 MBD6Q96DN6 1003 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 C4orf45Q96LM5 186 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 SORCS2Q96PQ0 1159 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 DOK1Q99704 481 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 ATF6BQ99941 703 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 CACNG6Q9BXT2 260 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 OR2J1Q9GZK6 312 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 HDHD2Q9H0R4 259 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 KCNN2Q9H2S1 579 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 PLK3Q9H4B4 646 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 MOV10Q9HCE1 1003 aaKnown RBP11.22□□□□□ -0.61
CHFR-216ENST00000538235 ZNF701Q9NV72 531 aaPredicted RBP11.22□□□□□ -0.61
CHFR-216ENST00000538235 ATPIF1Q9UII2 106 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 STARD10Q9Y365 291 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 GMPPBQ9Y5P6 360 aa11.22□□□□□ -0.61
CHFR-216ENST00000538235 FLNAP21333 2647 aaKnown RBP11.22□□□□□ -0.61
CHFR-216ENST00000538235 IGLV3-9A0A075B6K5 115 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 LOC100130705A0A1B0GUX0 176 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 PSMD9O00233 223 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 ATP6V1G2O95670 118 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 ZNF823P16415 610 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 PAX7P23759 505 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 PCSK6P29122 969 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 OPRL1P41146 370 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 PTH2RP49190 550 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 PPP1CBP62140 327 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 SNRPGP62308 76 aaKnown RBP11.21□□□□□ -0.61
CHFR-216ENST00000538235 KEAP1Q14145 624 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 HLXQ14774 488 aaPredicted RBP11.21□□□□□ -0.61
CHFR-216ENST00000538235 EFNB3Q15768 340 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 ZNF691Q5VV52 312 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 LRRN1Q6UXK5 716 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 PACRGLQ8N7B6 248 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 IL17RDQ8NFM7 739 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 OR8J1Q8NGP2 316 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 OR1J1Q8NGS3 322 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 NINJ1Q92982 152 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 RNF166Q96A37 237 aaPredicted RBP11.21□□□□□ -0.61
CHFR-216ENST00000538235 PERPQ96FX8 193 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 KCNS3Q9BQ31 491 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 WACQ9BTA9 647 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 CXXC4Q9H2H0 198 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 C1orf198Q9H425 327 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 CBLN4Q9NTU7 201 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 SLCO1C1Q9NYB5 712 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 ENOPH1Q9UHY7 261 aa11.21□□□□□ -0.61
CHFR-216ENST00000538235 HIVEP1P15822 2718 aa11.21□□□□□ -0.62
CHFR-216ENST00000538235 J3QRE1 110 aa11.2□□□□□ -0.62
CHFR-216ENST00000538235 SRSF10O75494 262 aaKnown RBP11.2□□□□□ -0.62
CHFR-216ENST00000538235 NCR1O76036 304 aa11.2□□□□□ -0.62
CHFR-216ENST00000538235 ABHD16AO95870 558 aa11.2□□□□□ -0.62
CHFR-216ENST00000538235 SBK2P0C263 348 aa11.2□□□□□ -0.62
CHFR-216ENST00000538235 ZNF250P15622 560 aa11.2□□□□□ -0.62
CHFR-216ENST00000538235 PAX1P15863 534 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms