RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 C17orf47Q8NEP4 570 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 OR2M3Q8NG83 312 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 OR5L2Q8NGL0 311 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 OR10Q1Q8NGQ4 319 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 TMEM163Q8TC26 289 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ZFP90Q8TF47 636 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 MITD1Q8WV92 249 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 OR5P2Q8WZ92 322 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 CDS1Q92903 461 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 RAB8BQ92930 207 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 MAL2Q969L2 176 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 FAM46BQ96A09 425 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 TMEM18Q96B42 140 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 SGK3Q96BR1 496 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 TESCQ96BS2 214 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 PPCDCQ96CD2 204 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 HAVCR1Q96D42 359 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 LGALS12Q96DT0 336 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 RMND5BQ96G75 393 aaPredicted RBP2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 MAGEB18Q96M61 343 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 CCDC115Q96NT0 180 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ANKRD27Q96NW4 1050 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 COL21A1Q96P44 957 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 OR7D2Q96RA2 312 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 SDF2Q99470 211 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 FAM173AQ9BQD7 235 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 BCL7BQ9BQE9 202 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 FAIM2Q9BWQ8 316 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 DPY30Q9C005 99 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 DSN1Q9H410 356 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 IL1RL2Q9HB29 575 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 LPAR2Q9HBW0 351 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 EML4Q9HC35 981 aaKnown RBP2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ACKR4Q9NPB9 350 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 CHST11Q9NPF2 352 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 INTS9Q9NV88 658 aaKnown RBP2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 FGFR1OP2Q9NVK5 253 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 GIN1Q9NXP7 522 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 C1RLQ9NZP8 487 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 VAPAQ9P0L0 249 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 IL36RNQ9UBH0 155 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 SLC9A8Q9Y2E8 581 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 C15orf41Q9Y2V0 281 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ZNF337Q9Y3M9 751 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 WDR45Q9Y484 360 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 WIF1Q9Y5W5 379 aa2.24□□□□□ -2.05
TNFRSF1A-210ENST00000537842 COL6A5A8TX70 2615 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 STAB1Q9NY15 2570 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 LOC105371242A0A075B767 164 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 TRBV5-7A0A0A0MS05 114 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 TRGV5A0A0B4J1U4 118 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 TRGV8A0A0C4DH27 118 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 A0A0J9YW62 118 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 A0A1W2PPR1 153 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 FAM90A10PA6NDY2 464 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 GOLGA6L10A6NI86 522 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ZNF814B7Z6K7 855 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 PPIAL4DF5H284 164 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 MS4A18H0YCH9 400 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 KLRC4-KLRK1H3BQV0 150 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 H3BTX0 84 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 FXYD1O00168 92 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 CCL21O00585 134 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 WNT9BO14905 357 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 UBDO15205 165 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ACOX3O15254 700 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 EMC8O43402 210 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 TPST1O60507 370 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 CDC40O60508 579 aaKnown RBP eCLIP2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 PRAF2O60831 178 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 RAMP1O60894 148 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 UGT2B17O75795 530 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 TRAPPC6AO75865 159 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 AQP8O94778 261 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 LYPD3O95274 346 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 OXSR1O95747 527 aaPredicted RBP2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ANGPTL1O95841 491 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 NPPAP01160 153 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 MT-ND1P03886 318 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 THY1P04216 161 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 P04436 131 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 LYNP07948 512 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 IFI6P09912 130 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 TFPTP0C1Z6 253 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 PNMTP11086 282 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ZNF24P17028 368 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 NAGAP17050 411 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 TBXA2RP21731 343 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 RPS4Y1P22090 263 aaKnown RBP2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 S100A3P33764 101 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 EVI2BP34910 448 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 RPL3P39023 403 aaKnown RBP2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 MNDAP41218 407 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 PTGFRP43088 359 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 RFX3P48380 749 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 MRPL19P49406 292 aaKnown RBP2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 ZNF136P52737 540 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 CLDN18P56856 261 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 CARD18P57730 90 aa2.23□□□□□ -2.05
TNFRSF1A-210ENST00000537842 NUP107P57740 925 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms