RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 ZIC3O60481 467 aa13.9□□□□□ -0.18
MKS1-204ENST00000537529 LMX1BO60663 402 aa13.9□□□□□ -0.18
MKS1-204ENST00000537529 VAMP5O95183 116 aa13.9□□□□□ -0.18
MKS1-204ENST00000537529 HPP00738 406 aa13.9□□□□□ -0.18
MKS1-204ENST00000537529 ALDOBP05062 364 aa13.9□□□□□ -0.18
MKS1-204ENST00000537529 FREM3P0C091 2139 aa13.9□□□□□ -0.18
MKS1-204ENST00000537529 SP9P0CG40 484 aa13.9□□□□□ -0.18
MKS1-204ENST00000537529 PRSS3P35030 304 aa13.9□□□□□ -0.18
MKS1-204ENST00000537529 H3F3AP84243 136 aa13.9□□□□□ -0.18
MKS1-204ENST00000537529 SSBP1Q04837 148 aaKnown RBP13.9□□□□□ -0.18
MKS1-204ENST00000537529 CHAF1BQ13112 559 aa13.9□□□□□ -0.18
MKS1-204ENST00000537529 MFAP5Q13361 173 aa13.9□□□□□ -0.18
MKS1-204ENST00000537529 PCGF3Q3KNV8 242 aa13.9□□□□□ -0.18
MKS1-204ENST00000537529 FGGYQ96C11 551 aa13.9□□□□□ -0.18
MKS1-204ENST00000537529 HYLS1Q96M11 299 aa13.9□□□□□ -0.18
MKS1-204ENST00000537529 SORCS2Q96PQ0 1159 aa13.9□□□□□ -0.18
MKS1-204ENST00000537529 PIGQQ9BRB3 760 aa13.9□□□□□ -0.18
MKS1-204ENST00000537529 OR10A4Q9H209 315 aa13.9□□□□□ -0.18
MKS1-204ENST00000537529 ING4Q9UNL4 249 aa13.9□□□□□ -0.18
MKS1-204ENST00000537529 A0A1B0GUH1 482 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 GJE1A6NN92 205 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 SMLR1H3BR10 107 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 KDM4BO94953 1096 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 TGM6O95932 706 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 P04436 131 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 GABRA1P14867 456 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 TCN2P20062 427 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 BDKRB2P30411 391 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 CSNK1A1P48729 337 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 RPS18P62269 152 aaKnown RBP13.89□□□□□ -0.19
MKS1-204ENST00000537529 METTL11BQ5VVY1 283 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 ALPK2Q86TB3 2170 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 NECAB3Q96P71 396 aaPredicted RBP13.89□□□□□ -0.19
MKS1-204ENST00000537529 TAAR9Q96RI9 348 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 ASH2LQ9UBL3 628 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 A0A0A6YYH2 397 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 A6NJ64 397 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 NPIPA2E9PIF3 369 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 NPIPA3F8WFD2 350 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 MASP2O00187 686 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 ARPC1BO15143 372 aaKnown RBP13.89□□□□□ -0.19
MKS1-204ENST00000537529 SULT1A3P0DMM9 295 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 SULT1A4P0DMN0 295 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 GNALP38405 381 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 VEGFCP49767 419 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 POU4F3Q15319 338 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 CCDC157Q569K6 752 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 RAB11FIP2Q7L804 512 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 BIVMQ86UB2 503 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 OR6N1Q8NGY5 312 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 NKX3-1Q99801 234 aaPredicted RBP13.89□□□□□ -0.19
MKS1-204ENST00000537529 DDA1Q9BW61 102 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 GON7Q9BXV9 100 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 NOX3Q9HBY0 568 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 GLTPQ9NZD2 209 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 FLVCR2Q9UPI3 526 aa13.89□□□□□ -0.19
MKS1-204ENST00000537529 MRPS18BQ9Y676 258 aaKnown RBP13.89□□□□□ -0.19
MKS1-204ENST00000537529 SULT1C2O00338 296 aa13.88□□□□□ -0.19
MKS1-204ENST00000537529 LDLRAD4O15165 306 aa13.88□□□□□ -0.19
MKS1-204ENST00000537529 FABP7O15540 132 aa13.88□□□□□ -0.19
MKS1-204ENST00000537529 NDUFB6O95139 128 aa13.88□□□□□ -0.19
MKS1-204ENST00000537529 GUCA1AP43080 201 aaPredicted RBP13.88□□□□□ -0.19
MKS1-204ENST00000537529 CLDN6P56747 220 aa13.88□□□□□ -0.19
MKS1-204ENST00000537529 RAC1P63000 192 aa13.88□□□□□ -0.19
MKS1-204ENST00000537529 SSPNQ14714 243 aa13.88□□□□□ -0.19
MKS1-204ENST00000537529 LINC00303Q3SY05 128 aa13.88□□□□□ -0.19
MKS1-204ENST00000537529 ZNF468Q5VIY5 522 aaPredicted RBP13.88□□□□□ -0.19
MKS1-204ENST00000537529 BEST4Q8NFU0 473 aa13.88□□□□□ -0.19
MKS1-204ENST00000537529 OR1M1Q8NGA1 313 aa13.88□□□□□ -0.19
MKS1-204ENST00000537529 PTX4Q96A99 478 aa13.88□□□□□ -0.19
MKS1-204ENST00000537529 UTP23Q9BRU9 249 aaKnown RBP13.88□□□□□ -0.19
MKS1-204ENST00000537529 RANBP3Q9H6Z4 567 aaPredicted RBP13.88□□□□□ -0.19
MKS1-204ENST00000537529 BEX1Q9HBH7 125 aa13.88□□□□□ -0.19
MKS1-204ENST00000537529 PTTG3PQ9NZH4 202 aa13.88□□□□□ -0.19
MKS1-204ENST00000537529 COL27A1Q8IZC6 1860 aaPredicted RBP13.88□□□□□ -0.19
MKS1-204ENST00000537529 JMJD7P0C870 316 aa13.87□□□□□ -0.19
MKS1-204ENST00000537529 ZNF20P17024 532 aa13.87□□□□□ -0.19
MKS1-204ENST00000537529 RAB6AP20340 208 aa13.87□□□□□ -0.19
MKS1-204ENST00000537529 SRD5A2P31213 254 aa13.87□□□□□ -0.19
MKS1-204ENST00000537529 ACTBP60709 375 aa13.87□□□□□ -0.19
MKS1-204ENST00000537529 GRB2P62993 217 aaKnown RBP13.87□□□□□ -0.19
MKS1-204ENST00000537529 ACTG1P63261 375 aa13.87□□□□□ -0.19
MKS1-204ENST00000537529 ANGPT1Q15389 498 aa13.87□□□□□ -0.19
MKS1-204ENST00000537529 FAAP20Q6NZ36 180 aa13.87□□□□□ -0.19
MKS1-204ENST00000537529 CREB3L2Q70SY1 520 aa13.87□□□□□ -0.19
MKS1-204ENST00000537529 ZNF627Q7L945 461 aa13.87□□□□□ -0.19
MKS1-204ENST00000537529 OR9K2Q8NGE7 335 aa13.87□□□□□ -0.19
MKS1-204ENST00000537529 OR5D14Q8NGL3 314 aa13.87□□□□□ -0.19
MKS1-204ENST00000537529 OR1J2Q8NGS2 313 aa13.87□□□□□ -0.19
MKS1-204ENST00000537529 TMEM54Q969K7 222 aa13.87□□□□□ -0.19
MKS1-204ENST00000537529 PNPLA2Q96AD5 504 aa13.87□□□□□ -0.19
MKS1-204ENST00000537529 LOXL4Q96JB6 756 aa13.87□□□□□ -0.19
MKS1-204ENST00000537529 TMEM138Q9NPI0 162 aa13.87□□□□□ -0.19
MKS1-204ENST00000537529 FARSAQ9Y285 508 aaKnown RBP13.87□□□□□ -0.19
MKS1-204ENST00000537529 PCDHGA5Q9Y5G8 931 aa13.87□□□□□ -0.19
MKS1-204ENST00000537529 TECTAO75443 2155 aa13.87□□□□□ -0.19
MKS1-204ENST00000537529 MEIKINA0A087WXM9 373 aa13.87□□□□□ -0.19
MKS1-204ENST00000537529 SDHBP21912 280 aa13.87□□□□□ -0.19
MKS1-204ENST00000537529 LSM6P62312 80 aaKnown RBP13.87□□□□□ -0.19
MKS1-204ENST00000537529 GUCA2AQ02747 115 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms