RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 KRCC1Q9NPI7 259 aaPredicted RBP6.02□□□□□ -1.45
YBX3-206ENST00000536823 YAE1D1Q9NRH1 226 aa6.02□□□□□ -1.45
YBX3-206ENST00000536823 NDE1Q9NXR1 346 aa6.02□□□□□ -1.45
YBX3-206ENST00000536823 MYEF2Q9P2K5 600 aaKnown RBP6.02□□□□□ -1.45
YBX3-206ENST00000536823 FZR1Q9UM11 496 aa6.02□□□□□ -1.45
YBX3-206ENST00000536823 SIGLEC7Q9Y286 467 aa6.02□□□□□ -1.45
YBX3-206ENST00000536823 ADAM18Q9Y3Q7 739 aa6.02□□□□□ -1.45
YBX3-206ENST00000536823 V9GYQ6 96 aa6.02□□□□□ -1.45
YBX3-206ENST00000536823 IGLV3-9A0A075B6K5 115 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 IGHV4-61A0A0C4DH41 118 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 TEX13CA0A0J9YWL9 993 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 A0A1W2PPL8 197 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 A0A1W2PPW3 197 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 SH3PXD2BA1X283 911 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 PRSS37A4D1T9 235 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 UNC119BA6NIH7 251 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 A8MV72 311 aaPredicted RBP6.01□□□□□ -1.45
YBX3-206ENST00000536823 XKRYO14609 159 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 AHCYL1O43865 530 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 NCR1O76036 304 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 NDUFB2O95178 105 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 STAMBPO95630 424 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 CCL2P13500 99 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 APEHP13798 732 aaKnown RBP6.01□□□□□ -1.45
YBX3-206ENST00000536823 ZNF250P15622 560 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 ZNF23P17027 643 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 MSR1P21757 451 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 LAP3P28838 519 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 GUCA1AP43080 201 aaPredicted RBP6.01□□□□□ -1.45
YBX3-206ENST00000536823 ALDH3B1P43353 468 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 GZMKP49863 264 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 MNAT1P51948 309 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 KLF3P57682 345 aaPredicted RBP6.01□□□□□ -1.45
YBX3-206ENST00000536823 FXYD6P3P58550 94 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 SELENOVP59797 346 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 PCBD1P61457 104 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 MXRA7P84157 204 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 PSG4Q00888 419 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 SRSF2Q01130 221 aaKnown RBP6.01□□□□□ -1.45
YBX3-206ENST00000536823 CD83Q01151 205 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 SPIBQ01892 262 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 ENDOGQ14249 297 aaKnown RBP6.01□□□□□ -1.45
YBX3-206ENST00000536823 ODF1Q14990 250 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 KRT72Q14CN4 511 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 MAD2L1BPQ15013 274 aaPredicted RBP6.01□□□□□ -1.45
YBX3-206ENST00000536823 FAM27BQ5VT28 67 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 IGFL4Q6B9Z1 124 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 ADCK1Q86TW2 530 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 DEFB107AQ8IZN7 70 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 BCL6BQ8N143 479 aaPredicted RBP6.01□□□□□ -1.45
YBX3-206ENST00000536823 ZNF786Q8N393 782 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 ZNF540Q8NDQ6 660 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 CPEB3Q8NE35 698 aaKnown RBP6.01□□□□□ -1.45
YBX3-206ENST00000536823 OR5AN1Q8NGI8 311 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 AKR7LQ8NHP1 331 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 FANK1Q8TC84 345 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 RASD2Q96D21 266 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 POM121L2Q96KW2 1035 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 FOXN4Q96NZ1 517 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 ZNF416Q9BWM5 594 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 BCL2L14Q9BZR8 327 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 OR2H1Q9GZK4 316 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 OR51B6Q9H340 312 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 NRIP3Q9NQ35 241 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 POLE4Q9NR33 117 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 GRHPRQ9UBQ7 328 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 AURKCQ9UQB9 309 aa6.01□□□□□ -1.45
YBX3-206ENST00000536823 SVEP1Q4LDE5 3571 aa6□□□□□ -1.45
YBX3-206ENST00000536823 ANK2Q01484 3957 aa6□□□□□ -1.45
YBX3-206ENST00000536823 LOC100509620A0A075B734 347 aa6□□□□□ -1.45
YBX3-206ENST00000536823 C5orf49A4QMS7 147 aa6□□□□□ -1.45
YBX3-206ENST00000536823 C12orf71A8MTZ7 269 aa6□□□□□ -1.45
YBX3-206ENST00000536823 H3BSA7 217 aa6□□□□□ -1.45
YBX3-206ENST00000536823 DYNC1I1O14576 645 aa6□□□□□ -1.45
YBX3-206ENST00000536823 PTP4A3O75365 173 aa6□□□□□ -1.45
YBX3-206ENST00000536823 GADD45GO95257 159 aa6□□□□□ -1.45
YBX3-206ENST00000536823 TXNDC12O95881 172 aa6□□□□□ -1.45
YBX3-206ENST00000536823 SCGB1D2O95969 90 aa6□□□□□ -1.45
YBX3-206ENST00000536823 FAM107AO95990 144 aa6□□□□□ -1.45
YBX3-206ENST00000536823 CLPTM1O96005 669 aa6□□□□□ -1.45
YBX3-206ENST00000536823 FABP3P05413 133 aa6□□□□□ -1.45
YBX3-206ENST00000536823 LCKP06239 509 aa6□□□□□ -1.45
YBX3-206ENST00000536823 LPLP06858 475 aa6□□□□□ -1.45
YBX3-206ENST00000536823 TACSTD2P09758 323 aa6□□□□□ -1.45
YBX3-206ENST00000536823 CTLA4P16410 223 aa6□□□□□ -1.45
YBX3-206ENST00000536823 ATP6V1B2P21281 511 aa6□□□□□ -1.45
YBX3-206ENST00000536823 FPR3P25089 353 aa6□□□□□ -1.45
YBX3-206ENST00000536823 LMO1P25800 156 aa6□□□□□ -1.45
YBX3-206ENST00000536823 STOMP27105 288 aa6□□□□□ -1.45
YBX3-206ENST00000536823 MSX2P35548 267 aaPredicted RBP6□□□□□ -1.45
YBX3-206ENST00000536823 WNT5AP41221 380 aa6□□□□□ -1.45
YBX3-206ENST00000536823 RAD52P43351 418 aa6□□□□□ -1.45
YBX3-206ENST00000536823 GDI2P50395 445 aaKnown RBP6□□□□□ -1.45
YBX3-206ENST00000536823 UCP2P55851 309 aa6□□□□□ -1.45
YBX3-206ENST00000536823 LGALS4P56470 323 aa6□□□□□ -1.45
YBX3-206ENST00000536823 ERVS71-1P61550 626 aa6□□□□□ -1.45
YBX3-206ENST00000536823 MRPS11P82912 194 aaKnown RBP6□□□□□ -1.45
YBX3-206ENST00000536823 RIN1Q13671 783 aa6□□□□□ -1.45
YBX3-206ENST00000536823 MTX3Q5HYI7 312 aa6□□□□□ -1.45
YBX3-206ENST00000536823 TOR2AQ5JU69 321 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms