RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 HLXQ14774 488 aaPredicted RBP12.09□□□□□ -0.47
RTN3P1-201ENST00000536295 KCNMB1Q16558 191 aa12.09□□□□□ -0.47
RTN3P1-201ENST00000536295 CLEC12AQ5QGZ9 265 aa12.09□□□□□ -0.47
RTN3P1-201ENST00000536295 SLC35F1Q5T1Q4 408 aa12.09□□□□□ -0.47
RTN3P1-201ENST00000536295 PGBD2Q6P3X8 592 aa12.09□□□□□ -0.47
RTN3P1-201ENST00000536295 LINC00346Q8IVM7 164 aa12.09□□□□□ -0.47
RTN3P1-201ENST00000536295 SDR9C7Q8NEX9 313 aa12.09□□□□□ -0.47
RTN3P1-201ENST00000536295 GJC3Q8NFK1 279 aa12.09□□□□□ -0.47
RTN3P1-201ENST00000536295 GNPDA2Q8TDQ7 276 aa12.09□□□□□ -0.47
RTN3P1-201ENST00000536295 PTP4A1Q93096 173 aa12.09□□□□□ -0.47
RTN3P1-201ENST00000536295 HAVCR1Q96D42 359 aa12.09□□□□□ -0.47
RTN3P1-201ENST00000536295 COG8Q96MW5 612 aa12.09□□□□□ -0.47
RTN3P1-201ENST00000536295 EGLN3Q9H6Z9 239 aa12.09□□□□□ -0.47
RTN3P1-201ENST00000536295 G6PC2Q9NQR9 355 aa12.09□□□□□ -0.47
RTN3P1-201ENST00000536295 TUBG2Q9NRH3 451 aa12.09□□□□□ -0.47
RTN3P1-201ENST00000536295 LOC105371242A0A075B767 164 aa12.08□□□□□ -0.48
RTN3P1-201ENST00000536295 ARPC3O15145 178 aa12.08□□□□□ -0.48
RTN3P1-201ENST00000536295 HLA-DQA2P01906 255 aa12.08□□□□□ -0.48
RTN3P1-201ENST00000536295 SBK2P0C263 348 aa12.08□□□□□ -0.48
RTN3P1-201ENST00000536295 ATP6V1B2P21281 511 aa12.08□□□□□ -0.48
RTN3P1-201ENST00000536295 GSSP48637 474 aa12.08□□□□□ -0.48
RTN3P1-201ENST00000536295 RGS6P49758 472 aa12.08□□□□□ -0.48
RTN3P1-201ENST00000536295 LCN2P80188 198 aa12.08□□□□□ -0.48
RTN3P1-201ENST00000536295 OR2T2Q6IF00 324 aa12.08□□□□□ -0.48
RTN3P1-201ENST00000536295 PGM2L1Q6PCE3 622 aa12.08□□□□□ -0.48
RTN3P1-201ENST00000536295 ZNF620Q6ZNG0 422 aa12.08□□□□□ -0.48
RTN3P1-201ENST00000536295 ATG16L2Q8NAA4 619 aa12.08□□□□□ -0.48
RTN3P1-201ENST00000536295 SLC26A10Q8NG04 563 aa12.08□□□□□ -0.48
RTN3P1-201ENST00000536295 OR9Q2Q8NGE9 314 aa12.08□□□□□ -0.48
RTN3P1-201ENST00000536295 OR52E2Q8NGJ4 325 aa12.08□□□□□ -0.48
RTN3P1-201ENST00000536295 ITLN1Q8WWA0 313 aa12.08□□□□□ -0.48
RTN3P1-201ENST00000536295 CDADC1Q9BWV3 514 aa12.08□□□□□ -0.48
RTN3P1-201ENST00000536295 HDHD2Q9H0R4 259 aa12.08□□□□□ -0.48
RTN3P1-201ENST00000536295 WDR76Q9H967 626 aa12.08□□□□□ -0.48
RTN3P1-201ENST00000536295 TMEM106BQ9NUM4 274 aa12.08□□□□□ -0.48
RTN3P1-201ENST00000536295 NPTNQ9Y639 398 aa12.08□□□□□ -0.48
RTN3P1-201ENST00000536295 A0A0G2JMP0 313 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 A0A0X1KG70 313 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 OR6C68A6NDL8 312 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 B2RBV5 119 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 TNFRSF11BO00300 401 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 AVPP01185 164 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 RAC2P15153 192 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 TNFRSF1AP19438 455 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 HIST1H3AP68431 136 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 COX10Q12887 443 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 PPP1R8Q12972 351 aaKnown RBP12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 TSPAN31Q12999 210 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 HIST2H3PS2Q5TEC6 136 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 DCAF12L2Q5VW00 463 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 CFAP77Q6ZQR2 320 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 C1orf229Q6ZS94 237 aaPredicted RBP12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 HIST2H3AQ71DI3 136 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 OR4M2Q8NGB6 313 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 OR10AD1Q8NGE0 317 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 OR52L1Q8NGH7 329 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 OR5L1Q8NGL2 311 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 OR2AJ1Q8NGZ0 328 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 ST7LQ8TDW4 575 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 APOBEC3DQ96AK3 386 aaPredicted RBP12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 OR2V2Q96R30 315 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 PITX2Q99697 317 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 COQ7Q99807 217 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 ATPIF1Q9UII2 106 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 PCDHB10Q9UN67 800 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 PPP1R3CQ9UQK1 317 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 LYVE1Q9Y5Y7 322 aa12.07□□□□□ -0.48
RTN3P1-201ENST00000536295 IGHV3-64DA0A0J9YX35 117 aa12.06□□□□□ -0.48
RTN3P1-201ENST00000536295 F5H5K5 113 aa12.06□□□□□ -0.48
RTN3P1-201ENST00000536295 SURF4O15260 269 aa12.06□□□□□ -0.48
RTN3P1-201ENST00000536295 KRT36O76013 467 aa12.06□□□□□ -0.48
RTN3P1-201ENST00000536295 IGHV2-70P01814 119 aa12.06□□□□□ -0.48
RTN3P1-201ENST00000536295 ADRA2CP18825 462 aa12.06□□□□□ -0.48
RTN3P1-201ENST00000536295 MNAT1P51948 309 aa12.06□□□□□ -0.48
RTN3P1-201ENST00000536295 PRSS12P56730 875 aa12.06□□□□□ -0.48
RTN3P1-201ENST00000536295 SLC36A3Q495N2 470 aa12.06□□□□□ -0.48
RTN3P1-201ENST00000536295 SPATS1Q496A3 300 aa12.06□□□□□ -0.48
RTN3P1-201ENST00000536295 SLC18B1Q6NT16 456 aa12.06□□□□□ -0.48
RTN3P1-201ENST00000536295 FBXW12Q6X9E4 464 aa12.06□□□□□ -0.48
RTN3P1-201ENST00000536295 ZBTB46Q86UZ6 589 aa12.06□□□□□ -0.48
RTN3P1-201ENST00000536295 FITM2Q8N6M3 262 aa12.06□□□□□ -0.48
RTN3P1-201ENST00000536295 CYB561A3Q8NBI2 242 aa12.06□□□□□ -0.48
RTN3P1-201ENST00000536295 BHLHE23Q8NDY6 225 aa12.06□□□□□ -0.48
RTN3P1-201ENST00000536295 BTBD10Q9BSF8 475 aa12.06□□□□□ -0.48
RTN3P1-201ENST00000536295 TMPRSS13Q9BYE2 586 aa12.06□□□□□ -0.48
RTN3P1-201ENST00000536295 ACTR3BQ9P1U1 418 aa12.06□□□□□ -0.48
RTN3P1-201ENST00000536295 IL19Q9UHD0 177 aa12.06□□□□□ -0.48
RTN3P1-201ENST00000536295 CDH10Q9Y6N8 788 aa12.06□□□□□ -0.48
RTN3P1-201ENST00000536295 FBN3Q75N90 2809 aa12.06□□□□□ -0.48
RTN3P1-201ENST00000536295 TANC2Q9HCD6 1990 aa12.05□□□□□ -0.48
RTN3P1-201ENST00000536295 H0YL77 283 aa12.05□□□□□ -0.48
RTN3P1-201ENST00000536295 J3QW42 95 aa12.05□□□□□ -0.48
RTN3P1-201ENST00000536295 IDH3BO43837 385 aa12.05□□□□□ -0.48
RTN3P1-201ENST00000536295 CCNB2O95067 398 aa12.05□□□□□ -0.48
RTN3P1-201ENST00000536295 VENTXO95231 258 aa12.05□□□□□ -0.48
RTN3P1-201ENST00000536295 GASTP01350 101 aa12.05□□□□□ -0.48
RTN3P1-201ENST00000536295 EPHA1P21709 976 aa12.05□□□□□ -0.48
RTN3P1-201ENST00000536295 PYCR1P32322 319 aa12.05□□□□□ -0.48
RTN3P1-201ENST00000536295 SCGB2A2Q13296 93 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms